DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and ceh-23

DIOPT Version :9

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_498700.1 Gene:ceh-23 / 176096 WormBaseID:WBGene00000446 Length:305 Species:Caenorhabditis elegans


Alignment Length:331 Identity:91/331 - (27%)
Similarity:128/331 - (38%) Gaps:88/331 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPA 246
            :|.|.:.....:..|.|......|.|..|.:|....||.|..|   ||.|:....  ||:.|   
 Worm    14 TPLPVSSSSLTDVLQTIAALQACPTSCIPSTSTGMLSPNLPFS---ATIPRVNLF--PPSQP--- 70

  Fly   247 MMHPGGAGPMMMPGMPPAGLVRPF-PMGPGGPPMPQGQPGLPDIKALPPYINAP-------PELP 303
                  |..:::|.:|    .:|| |    .|.:.|..|..  ::||...:.|.       || |
 Worm    71 ------ANSLILPTIP----AQPFIP----NPSLLQANPSA--VEALANALFATTSRRASCPE-P 118

  Fly   304 PQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAG----LPPHAAQFMPN----PGMARDSYQL 360
            |         |..|....||......|.....:...    |....||.||.    |||....||.
 Worm   119 P---------ASSQATVTLQVPSTGSPERRRYSETNMEVLLREQLAQLMPPTSQLPGMPGCYYQH 174

  Fly   361 YPWL-----------------------LSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLK 402
            .|..                       ::...|...||              :.||.:..:|..:
 Worm   175 VPAAGTSGIQGSLDAALMGAVPLAMNSMAHSRRAANHR--------------KARTIYGTTQTQQ 225

  Fly   403 LEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSG 467
            ||..|:...|||||||:.|||.|.||.:||::||||||:||:|.|||::: .....:::...|..
 Worm   226 LEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQ-STTLEEKSEEIGKD 289

  Fly   468 DEDDDE 473
            :|:|||
 Worm   290 EEEDDE 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeobox 392..444 CDD:278475 28/51 (55%)
ceh-23NP_498700.1 Homeobox 215..267 CDD:278475 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000921
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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