DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Meox1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_036012267.1 Gene:Meox1 / 17285 MGIID:103220 Length:271 Species:Mus musculus


Alignment Length:288 Identity:74/288 - (25%)
Similarity:101/288 - (35%) Gaps:80/288 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PQTPPATLTLIPGSPPHHLMAPPAHGL----PYPHPHAQQQHLQAPHPHPHLS----PAQQHVL- 120
            || |||.:.....:|  |.....|.||    |.|....|:....|...:|..|    .|..|.| 
Mouse    12 PQ-PPAPVWGCLRNP--HSEDSSASGLSHYPPTPFSFHQKSDFPATAAYPDFSASCLAATPHSLP 73

  Fly   121 HQHLLMQQQHPG---TPKSHQDIQELLQRLHHNAA-----MASGLSP---------------LQT 162
            ....:..:|||.   ||..|..|.|..|||:...|     |.:| ||               |.|
Mouse    74 RTERIFNEQHPAFPQTPDWHFPISEAGQRLNLGPAGSAREMGAG-SPGLVDGTAGLGEDCMVLGT 137

  Fly   163 RLSPETEQPQMAVSLKRERS-----PAP-PAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTL 221
             ::.|||  :.:...|:|||     |.| ..:|..|..:..:      |....|:.....|....
Mouse   138 -IANETE--KKSSRRKKERSGQSLVPEPEDEVETCEGGSACV------PTGAGPRGWGLCSFSKF 193

  Fly   222 LISSPHATPPQQQQ--QQPPPNYPKPAMMHPGGAGPMMM-----PGMPPAGLVRPFPMGPGGPPM 279
            .:   ..:..|.|:  ::||..:|.|        ||.:.     ||.|...|........|....
Mouse   194 RV---RCSKDQNQERLKEPPLQFPPP--------GPTLSHLWTHPGQPAHTLRCEVAQYVGALNF 247

  Fly   280 PQGQPGLPDIKALPPYINAPP----ELP 303
            |:|       .|..|||:|.|    :||
Mouse   248 PEG-------LAQRPYISAAPSPGLQLP 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649
Meox1XP_036012267.1 None
Blue background indicates that the domain is not in the aligned region.

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