Protein Alignment ems and Hoxc6

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_006520531.1
• Gene: Hoxc6 / 15425
• MGIID: 96197
• Length: 243
• Species: Mus musculus
• Alignment Length: 224
• Identity: 59/224 - (26%)
• Similarity: 89/224 - (39%)
• Gaps: 38/224 - (16%)

  Fly   282 GQPGLPDI----KALPPY--------------INAPPELPPQHN--------PHLIAAAQFQMAA 320
            ||..||::    .|..|.              |.:.|...||.|        |:...:..|....
Mouse    17 GQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEK 81

  Fly   321 ALQAG---HVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWL--LSRHGRIFPHRFPGSF 380
            .:.:.   :.||.....:.|........:..|....|  |.|:|||:  ::.|...|   .|||.
Mouse    82 DMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKA--SIQIYPWMQRMNSHSVCF---VPGSL 141

  Fly   381 LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            .|......:|.|..:|..|.|:||..|..|:|:....|..:|..|.|:|.|:|:||||||.|.|:
Mouse   142 GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 206

  Fly   446 MQQ--EDEKGGEGGSQRNMHNGSGDEDDD 472
            ...  ....||.||:..:...|..::.::
Mouse   207 ESNLTSTLSGGGGGATADSLGGKEEKREE 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
Hoxc6	XP_006520531.1	Homeodomain	150..206	CDD:459649	24/55 (44%)