Protein Alignment ems and Hoxc13

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_034594.1
• Gene: Hoxc13 / 15422
• MGIID: 99560
• Length: 328
• Species: Mus musculus
• Alignment Length: 288
• Identity: 73/288 - (25%)
• Similarity: 108/288 - (37%)
• Gaps: 71/288 - (24%)

  Fly   181 RSPAPPAMEQ--------AENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSP----------- 226
            |.|||....|        |...|::..||..||         .|||.||....|
Mouse    78 RPPAPLGAPQGAVYTDIPAPEAARQCAPPPAPP---------TSSSATLGYGYPFGGSYYGCRLS 133

  Fly   227 HATPPQQQQQQPPPNYPKPAMMHPGGAGPM---MMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPD 288
            |....||          ||...|||...|.   .:||...:...:.|...|......|..||..|
Mouse   134 HNVNLQQ----------KPCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGYLD 188

  Fly   289 IKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGM 353
            :..:|. |:..||  |:|:. ||....:| ..||..|.     .:....:.....:|....:|
Mouse   189 VSVVPG-ISGHPE--PRHDA-LIPVEGYQ-HWALSNGW-----DSQVYCSKEQSQSAHLWKSP-- 241

  Fly   354 ARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAER 418
                              ||...|....|..:|:.::.|..::..||.:||..:.:::::...:|
Mouse   242 ------------------FPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKR 288

  Fly   419 KALAQNLNLSETQVKVWFQNRRTKHKRM 446
            :.::...||||.||.:||||||.|.|::
Mouse   289 RRISATTNLSERQVTIWFQNRRVKEKKV 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	19/55 (35%)
Hoxc13	NP_034594.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	23..48
		HoxA13_N	52..166	CDD:463521	28/106 (26%)
		Homeodomain	259..310	CDD:459649	16/50 (32%)