Protein Alignment ems and Hoxb6

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Alignment Length: 362
• Identity: 86/362 - (23%)
• Similarity: 126/362 - (34%)
• Gaps: 118/362 - (32%)

  Fly   157 LSPLQTRLSPETEQPQMAVS------LKRERSP-APPAMEQAENPAQRIQPPH--------TPPK 206
            :|..:..||.::|:.:..:|      .|.::.| ||.::           |||        .||.
Mouse     3 ISEKRNNLSLKSEKGKRRLSGWDNIIWKLKKIPNAPLSL-----------PPHPFESGGGQNPPS 56

  Fly   207 SVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPP--------NYPKPAMMHPG-----GAGPMMM 258
            |...:.|...:...:       .|.:||:.:.||        |...|..:..|     |..|:..
Mouse    57 SAKARRSDYKTQQII-------NPAEQQRPRAPPLPMSSYFVNSTFPVTLASGQESFLGQLPLYS 114

  Fly   259 PGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQ 323
            .|........|.|.|||    |....|.......||                 |...:..||...
Mouse   115 SGYADPLRHYPAPYGPG----PGQDKGFAASSYYPP-----------------AGGGYGRAAPCD 158

  Fly   324 AGHVLGP---------AAAAAAAAGLPPHAAQFMPNP---GMARD------------SYQLYPWL 364
                .||         ||.|.:.|..||   .|.|.|   ..|:|            |..:|||:
Mouse   159 ----YGPAPAFYREKDAACALSGADEPP---PFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWM 216

  Fly   365 LSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429
            ...:.      ...|...|..|:.::..|.:   |.|:||..|..|:|:....|..:|..|.|:|
Mouse   217 QRMNS------CNSSSFGPSGRRGRQTYTRY---QTLELEKEFHYNRYLTRRRRIEIAHALCLTE 272

  Fly   430 TQVKVWFQNRRTKHKR-----------MQQEDEKGGE 455
            .|:|:||||||.|.|:           .::|:||..|
Mouse   273 RQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPAE 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	22/55 (40%)
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	23/58 (40%)