Protein Alignment ems and Hoxb1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Alignment Length: 332
• Identity: 92/332 - (27%)
• Similarity: 120/332 - (36%)
• Gaps: 77/332 - (23%)

  Fly   204 PPKSVSPQSSQPSSSPTL------------LISSPHATPPQQQQQQPPP----NYPKPAMMHPGG 252
            |....:|.|..|.|:|.:            |.||..........||||.    ::|.||   |.|
Mouse    19 PSAYSAPTSFPPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPA---PSG 80

  Fly   253 AGPMMM-PGMPPA------------GLVRPFPMGP--GGPPMPQGQPGLPDIKALPPYINAPPEL 302
            ..|... |...|:            ....|...|.  ||.|...|..|:    ...||   ||..
Mouse    81 YAPAACNPSYGPSQYYSVGQSEGDGSYFHPSSYGAQLGGLPDSYGAGGV----GSGPY---PPPQ 138

  Fly   303 PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFM------PNPGMARDSYQLY 361
            ||.....   .|.|..|..|.:.....|.::..:.  |.|....:|      |..|.|:.|:.|
Mouse   139 PPYGTEQ---TATFASAYDLLSEDKESPCSSEPST--LTPRTFDWMKVKRNPPKTGRAQRSHFL- 197

  Fly   362 PWLLSRHGRIFP----HRFPGSFLVPP------FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGA 416
              .|:|.....|    |.|....|:..      ...|..:||.|:..||.:||..|..|:|:..|
Mouse   198 --SLARAYTEGPEPGLHSFLQLLLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRA 260

  Fly   417 ERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGE--GGSQRNMHNGSGDEDDDELIDMEM 479
            .|..:|..|.|:|||||:||||||.|.|:.::|   ||.  .|........:||..|       .
Mouse   261 RRVEIAATLELNETQVKIWFQNRRMKQKKRERE---GGRMPAGPPGCPKEAAGDASD-------Q 315

  Fly   480 DECPSDE 486
            ..|.|.|
Mouse   316 SACTSPE 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	27/52 (52%)