Protein Alignment ems and Hoxa7

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001406200.1
• Gene: Hoxa7 / 15404
• MGIID: 96179
• Length: 270
• Species: Mus musculus
• Alignment Length: 322
• Identity: 74/322 - (22%)
• Similarity: 117/322 - (36%)
• Gaps: 80/322 - (24%)

  Fly   194 PAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMM 258
            |::.:.|.| |.:..:.....|:.||.|..:...:|.|..:...      :|||
Mouse     2 PSRLLAPLH-PTRREAATGRAPAPSPPLCRAYTMSTAPSIRAPS------RPAM----------- 48

  Fly   259 PGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQ 323
                            ...|.|...|..|..|..|......|:.|..........|:.:..:|..
Mouse    49 ----------------AWEPTPTTCPAPPTTKTSPGSAVTSPKAPATRRTRACFTARPKPVSAST 97

  Fly   324 AG-----HVLGPAAAAAAAAGLPPHAAQFMP--NPGMARDSYQLYPWLLSRHGRIFPHRFPGSF- 380
            .|     ..|.|:..::.:. |.|..:..:|  .||          :|..|.|.:.|   |||.
Mouse    98 PGCAVQSFFLSPSFLSSISF-LTPALSPLLPFFRPG----------FLSQRQGELRP---PGSLT 148

  Fly   381 ----------------LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429
                            ...|.|  ||.|..::..|.|:||..|..|:|:....|..:|..|.|:|
Mouse   149 HHCTRGHFQNGAEANGTEGPDR--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 211

  Fly   430 TQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGS--GDEDDDELIDMEMDECPSDEEHE 489
            .|:|:||||||.|.|:..:::.:......:..:.:.|  .|:.|:|    |.:|...:||.|
Mouse   212 RQIKIWFQNRRMKWKKEHKDESQAPTAAPEDAVPSVSTAADKADEE----EEEEEEEEEEEE 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
Hoxa7	NP_001406200.1	Homeodomain	171..227	CDD:459649	24/55 (44%)