Protein Alignment ems and Hoxa6

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_034584.1
• Gene: Hoxa6 / 15403
• MGIID: 96178
• Length: 232
• Species: Mus musculus
• Alignment Length: 281
• Identity: 61/281 - (21%)
• Similarity: 87/281 - (30%)
• Gaps: 121/281 - (43%)

  Fly   240 PNYPKPAMMHPGGAGPMM--MPGMPPAG--LVRPFPMGPGGPPMPQGQPGLP------------- 287
            |.:|...   |.|....:  :| :.|||  .:||||...|...:|......|
Mouse     8 PTFPGSL---PSGQDSFLGQLP-LYPAGYDALRPFPASYGASSLPDKTYTSPCFYQQSNSVLACN 68

  Fly   288 ---------------DIKALPP-----------YINAPPELPPQHNPHLIAAAQFQMAAALQAGH 326
                           |:....|           |::..||  .|:.|.               |.
Mouse    69 RASYEYGASCFYSDKDLSGASPSGNNKQRGPGDYLHFSPE--QQYKPD---------------GS 116

  Fly   327 VLGPAAAAAAAAGLPPHAAQFMPNPGMARD-SYQLYPWL----------LSRHGRIFPHRFPGSF 380
            |.|.|                :...|..|. :..:|||:          ...|||
Mouse   117 VQGKA----------------LHEEGTDRKYTSPVYPWMQRMNSCAGAVYGSHGR---------- 155

  Fly   381 LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
                     |.|..::..|.|:||..|..|:|:....|..:|..|.|:|.|:|:||||||.|.|:
Mouse   156 ---------RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 211

  Fly   446 M-----------QQEDEKGGE 455
            .           :..:.|.||
Mouse   212 ENKLINSTQASGEDSEAKAGE 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	23/55 (42%)
Hoxa6	NP_034584.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..126		10/70 (14%)
		Antp-type hexapeptide	135..140		3/4 (75%)
		Homeodomain	155..211	CDD:459649	24/74 (32%)