DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and GSC

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_776248.1 Gene:GSC / 145258 HGNCID:4612 Length:257 Species:Homo sapiens


Alignment Length:275 Identity:64/275 - (23%)
Similarity:99/275 - (36%) Gaps:95/275 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 AGPMMMPGM-------------PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPP 304
            |.|::.|.:             ...|...|.|:.|||..:|....|              ..|  
Human    30 AAPVVFPALHGDSLYGASGGASSDYGAFYPRPVAPGGAGLPAAVSG--------------SRL-- 78

  Fly   305 QHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQ---FMPNPGMARDSYQLYPWLLS 366
            .:|.:.......|.|.       :|||...|    :||..||   .:|.|               
Human    79 GYNNYFYGQLHVQAAP-------VGPACCGA----VPPLGAQQCSCVPTP--------------- 117

  Fly   367 RHGRIFP-HRFPGSFLVPPF--------------------------RKPKRIRTAFSPSQLLKLE 404
                  | :..|||.||.|.                          |:.:|.||.|:..||..||
Human   118 ------PGYEGPGSVLVSPVPHQMLPYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALE 176

  Fly   405 HAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK---HKRMQQEDEKGGEGGSQRNMHNGS 466
            :.|:..:|.....|:.||:.::|.|.:|:|||:|||.|   .||...|:.:..|..::.:....|
Human   177 NLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSSSEESENAEKWNKTSSSKAS 241

  Fly   467 GDEDDDE-LIDMEMD 480
            .::.::| ..|::.|
Human   242 PEKREEEGKSDLDSD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 23/58 (40%)
GSCNP_776248.1 Homeodomain 161..217 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..257 9/44 (20%)

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