DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Barx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_031552.2 Gene:Barx1 / 12022 MGIID:103124 Length:254 Species:Mus musculus


Alignment Length:212 Identity:61/212 - (28%)
Similarity:80/212 - (37%) Gaps:63/212 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 GQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAG-HVLGPAAAAAAA-------- 337
            |:||....        .|||....|.||...:...:.......| ....||||||||        
Mouse     5 GEPGAARF--------GPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFGV 61

  Fly   338 ----AGLPPH----------AAQF----------------------MPNPGMARDSYQLYPWLLS 366
                |..|.|          ||.|                      ||.|..|..    .|..|.
Mouse    62 QALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLGSALLAAGPGMPGPAGASH----LPLELQ 122

  Fly   367 RHGRI--FPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429
            ..|::  .....||:    ..:|.:|.||.|:..||:.||..||..:|:...:|..||::|.||:
Mouse   123 LRGKLEAAGSGEPGA----KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQ 183

  Fly   430 TQVKVWFQNRRTKHKRM 446
            .|||.|:||||.|.|::
Mouse   184 LQVKTWYQNRRMKWKKI 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
Barx1NP_031552.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 6/22 (27%)
Homeodomain 143..199 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254
Blue background indicates that the domain is not in the aligned region.

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