DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Alx3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_031467.1 Gene:Alx3 / 11694 MGIID:1277097 Length:343 Species:Mus musculus


Alignment Length:233 Identity:71/233 - (30%)
Similarity:87/233 - (37%) Gaps:58/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 PFPMGP-GGP--------PMPQGQP-GLPDIKALPPYINAP------------PELPPQHNPHLI 311
            ||.:|| .||        |.|||.| ..|.:...||  ..|            |.||....|...
Mouse     8 PFSVGPAAGPYAAAGDEAPGPQGTPDAAPHLHPAPP--RGPRLSRFPACGPLEPYLPEPAKPPAK 70

  Fly   312 AAAQFQMAAALQAGHVL-GPAAA---AAAAAGLP-------------PHAAQFMPNPGMARDSYQ 359
            ..........|..||.. |.|.|   |:.||..|             |...|..|.|.:|..|..
Mouse    71 YLQDLGPGPVLNGGHFYEGSAEAEEKASKAASFPQLPVDCRGGPRDGPSNVQASPGPCLASLSVP 135

  Fly   360 LYPWLLSRHGRIFPHRFPGSF-LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQ 423
            |.|.|            |.|. |.....|.:|.||.||..||.:||..|:...|.....|:.||.
Mouse   136 LSPGL------------PDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAL 188

  Fly   424 NLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRN 461
            ..:|:|.:|:|||||||.|.::.    |:.|:....||
Mouse   189 RTDLTEARVQVWFQNRRAKWRKR----ERYGKMQEGRN 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
Alx3NP_031467.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..122 30/115 (26%)
Homeodomain 154..210 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..343
Blue background indicates that the domain is not in the aligned region.

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