Protein Alignment ems and hoxa9

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_031760007.1
• Gene: hoxa9 / 116411596
• XenbaseID: XB-GENE-481973
• Length: 261
• Species: Xenopus tropicalis
• Alignment Length: 282
• Identity: 69/282 - (24%)
• Similarity: 104/282 - (36%)
• Gaps: 75/282 - (26%)

  Fly   194 PAQRIQPPHTPPKSVSPQSSQPS-SSPTLLISSP-HATPPQ-----------QQQQQPP-----P 240
            |....|||.....:..|..:..| .|.|.:.||| :...||           ....|||     .
 Frog    30 PGSLTQPPRQAASAEHPDFTPCSFQSKTSVFSSPWNPLHPQTANNVSSVYHPYMHHQPPISASDG 94

  Fly   241 NYPKPAMMHPGGAGPMMMPGMPPAGL--VRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELP 303
            .|.: :.:.|..||.:..||.|.:..  ::|.|:.|     .:|.....|.:.| |..:.|...|
 Frog    95 RYMR-SWLDPMAAGSLPFPGFPSSRSYGIKPEPVAP-----RRGDCSTFDSRPL-PVSDYPCGSP 152

  Fly   304 PQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRH 368
            ...:..:                            |.||.|.....||.               :
 Frog   153 TDRDKQI----------------------------GDPPFAVTNGENPS---------------N 174

  Fly   369 GR---IFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSET 430
            |.   |.|:....::|  ..|..::.|..::..|.|:||..|..|.|:....|..:|:.|||:|.
 Frog   175 GEKPPIDPNNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTER 237

  Fly   431 QVKVWFQNRRTKHKRMQQEDEK 452
            |||:||||||.|.|::.::..|
 Frog   238 QVKIWFQNRRMKMKKINKDRSK 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
hoxa9	XP_031760007.1	Hox9_act	1..182	CDD:461369	40/201 (20%)
		Homeodomain	196..252	CDD:459649	24/55 (44%)