Protein Alignment ems and Gbx2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_446160.1
• Gene: Gbx2 / 114500
• RGDID: 621866
• Length: 348
• Species: Rattus norvegicus
• Alignment Length: 347
• Identity: 90/347 - (25%)
• Similarity: 116/347 - (33%)
• Gaps: 121/347 - (34%)

  Fly   204 PPKSVSPQ----SSQPSSSPTLLISSPHATP------------PQQQQQQPPPNYPKPAMMHPGG 252
            ||..:..|    ||...|..:|:.|.|..:|            |.:....|||..|.||:  |..
  Rat     6 PPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPPPPAL--PQA 68

  Fly   253 AGPMMMPGMPPAGLVRPFPMGPGG--PPMPQGQPGLPDIKA-LPPYINAPPE---------LPPQ 305
            |   :.|.:|||......|..|.|  ..:.||......:.| ||...:|.|:         ..||
  Rat    69 A---LQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQHQEAAAARKFAPQ 130

  Fly   306 HNPHLIAAAQFQMAAALQA------------GHVLGPAAAAAAAAGL------------------ 340
            ..|   ....|..:.||||            |.:|..:||.|..|.|
  Rat   131 PLP---GGGNFDKSEALQADTEDGKAFLAKEGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDP 192

  Fly   341 -------------------------------PPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPH 374
                                           |.||.:..|..|.|..|
  Rat   193 KGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAAGS----------------- 240

  Fly   375 RFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNR 439
                   .....|.:|.||||:..|||:||..|...:|:...||..:|..|.|||.|||:|||||
  Rat   241 -------TTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNR 298

  Fly   440 RTKHKRMQQEDEKGGEGGSQRN 461
            |.|.||::..:.....|...||
  Rat   299 RAKWKRVKAGNANSKTGEPSRN 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
Gbx2	NP_446160.1	Homeodomain	248..304	CDD:459649	29/55 (53%)