DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and nkx3-2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_002940787.1 Gene:nkx3-2 / 100497965 XenbaseID:XB-GENE-876834 Length:329 Species:Xenopus tropicalis


Alignment Length:67 Identity:36/67 - (53%)
Similarity:46/67 - (68%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            |.||.::.||.|.|||.:|:.:||..|...:|:.|.||..||.:|.|:|||||:||||||.|.||
 Frog   195 LEPPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKR 259

  Fly   446 MQ 447
            .|
 Frog   260 RQ 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 30/55 (55%)
nkx3-2XP_002940787.1 Homeodomain 203..259 CDD:459649 30/55 (55%)

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