Protein Alignment ems and hoxd9

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_012826755.2
• Gene: hoxd9 / 100497640
• XenbaseID: XB-GENE-485791
• Length: 278
• Species: Xenopus tropicalis
• Alignment Length: 458
• Identity: 84/458 - (18%)
• Similarity: 121/458 - (26%)
• Gaps: 219/458 - (47%)

  Fly    26 FSIESIVGND--------VSTAGGNSTPDLSGPQSPPPGERNVPGSPPQTPPATLTLIPGSPPHH 82
            :.::|::|::        .|.||.|:||..||.............|.....|.:.|.:
 Frog    10 YYVDSLIGHEGEEGYGARFSQAGQNTTPRPSGDGDTSDFHSCSFASKSGVFPTSWTTV------- 67

  Fly    83 LMAPPAHGLP--YPHPHAQQQHLQAPHPHPHLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQ 145
             ...||.|:.  | ||:..|.||.|                            ......::..|.
 Frog    68 -QPQPAAGMTGIY-HPYVGQSHLAA----------------------------DSGRYTVRSWLD 102

  Fly   146 RLHHNAAMASGLSPLQTR---LSPETEQ---------------PQMAVSLKRERSPAPPAMEQAE 192
            .:...|...||. |...|   :.||:..               |:...:...|.:..|||.|.|.
 Frog   103 PISSAAPSFSGF-PANGRNYGIKPESAAKRTECSSFGPQALTLPEYTCNSFPESTEKPPAKEPAA 166

  Fly   193 NPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMM 257
             |::  :|..|..|....|..|....             ||||||..||.|....:|.
 Frog   167 -PSE--EPNSTELKEEKEQQQQQQQQ-------------QQQQQQLDPNNPAANWIHA------- 208

  Fly   258 MPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAAL 322
                                                                             
 Frog   209 ----------------------------------------------------------------- 208

  Fly   323 QAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRK 387
                                                                           |.
 Frog   209 ---------------------------------------------------------------RS 210

  Fly   388 PKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEK 452
            .::.|..::..|.|:||..|..|.|:....|..:|:.|||:|.|||:||||||.|.|:|.:  ||
 Frog   211 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNK--EK 273

  Fly   453 GGE 455
            |.:
 Frog   274 GNK 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
hoxd9	XP_012826755.2	Hox9_act	1..181	CDD:461369	42/211 (20%)
		Homeodomain	212..260	CDD:459649	18/47 (38%)