DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and nkx3-3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_002937227.1 Gene:nkx3-3 / 100485176 XenbaseID:XB-GENE-479908 Length:241 Species:Xenopus tropicalis


Alignment Length:62 Identity:33/62 - (53%)
Similarity:40/62 - (64%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 PFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            |....||.|.|||.:|:.:||..|...:|:.|.||..||..|.|:|||||:||||||.|.||
 Frog   113 PKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKR 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 30/55 (55%)
nkx3-3XP_002937227.1 Homeodomain 118..174 CDD:459649 30/55 (55%)

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