DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and hoxb6

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_002938066.1 Gene:hoxb6 / 100124320 XenbaseID:XB-GENE-1006005 Length:223 Species:Xenopus tropicalis


Alignment Length:103 Identity:23/103 - (22%)
Similarity:34/103 - (33%) Gaps:30/103 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 SDANRLSLMVYARDPLVFFQKYNKEVVEFMNGHGFGGNVFWNSPKPIYQGPDCEWPSEKEVFARR 273
            ||:.:.||:..........|...:|:.|...                      .|..||:.| :.
 Frog   287 SDSEKFSLLSKLEKSQARVQSLERELEESAR----------------------RWGREKQQF-KT 328

  Fly   274 VLKNQEMNERNKNGTSDPILSGMPLADMIRDPKRTLER 311
            .|..|||.....|.|   ||..:|    |::|...:.|
 Frog   329 QLSEQEMGFSRTNTT---ILHHIP----IKEPDPPIRR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649
hoxb6XP_002938066.1 Homeodomain 146..202 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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