Protein Alignment ems and hoxa2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_004915456.1
• Gene: hoxa2 / 100038099
• XenbaseID: XB-GENE-488087
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 276
• Identity: 81/276 - (29%)
• Similarity: 115/276 - (41%)
• Gaps: 81/276 - (29%)

  Fly   204 PPKSVSPQSSQPSSSPTLLISSPHAT--PPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGL 266
            ||...:.|||...||     :..|:|  ||..:|..|..|   |. .||..:.|
 Frog    26 PPVGDTFQSSSIKSS-----ALSHSTLIPPPFEQTIPSLN---PG-SHPRHSRP----------- 70

  Fly   267 VRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPA 331
             :..|.|.|..|:|.|              :.|||.|......  |:.:..:||          |
 Frog    71 -KHSPNGHGDSPVPAG--------------SLPPEYPWMKEKK--ASKKAPIAA----------A 108

  Fly   332 AAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIF---PHRFPGSFLVPPFRKPKRIRT 393
            .|||||:..|...|                  .|| |..|.   .:...||         :|:||
 Frog   109 TAAAAASAAPATTA------------------CLS-HKEIIEIQDNSSGGS---------RRLRT 145

  Fly   394 AFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ-EDEKGGEGG 457
            |::.:|||:||..|..|:|:....|..:|..|:|:|.||||||||||.||||..| ::.:.|:|.
 Frog   146 AYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNGDGK 210

  Fly   458 SQRNMHNGSGDEDDDE 473
            .:....:..|:|:.::
 Frog   211 FKHLDDSEKGEEEKEK 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
hoxa2	XP_004915456.1	Homeodomain	141..197	CDD:459649	29/55 (53%)