Protein Alignment ems and cdx1b

DIOPT Version :9

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001092232.1
• Gene: cdx1b / 100004956
• ZFINID: ZDB-GENE-070615-29
• Length: 255
• Species: Danio rerio
• Alignment Length: 263
• Identity: 65/263 - (24%)
• Similarity: 92/263 - (34%)
• Gaps: 89/263 - (33%)

  Fly   212 SSQPSS--SPTLLISSPHATPPQQQQQQPPPNYPKPAMMH--PG-----------GAGPMMMPGM 261
            |..|:|  .|:|.::..:..|       .||.||.....|  ||           |:.....|
Zfish    12 SMYPNSVRHPSLNLNPQNFVP-------APPQYPDFTGYHHVPGITTNDPHHSQTGSWNPAYP-- 67

  Fly   262 PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGH 326
            ||.....|:..|.|......||.|.           :|||......|.|:
Zfish    68 PPREEWTPYGPGSGVSSSSTGQLGF-----------SPPEFSSVQTPGLL--------------- 106

  Fly   327 VLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPP------F 385
               .::..::...|.|:|.:..|           |.|:...              |||      .
Zfish   107 ---QSSINSSVGQLSPNAQRRNP-----------YDWMRRS--------------VPPASSGGKT 143

  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKH-----KR 445
            |...:.|..::..|.|:||..|..::|:....:..||..|:|||.|||:||||||.|.     |:
Zfish   144 RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATALSLSERQVKIWFQNRRAKERKINKKK 208

  Fly   446 MQQ 448
            |||
Zfish   209 MQQ 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeobox	392..444	CDD:278475	23/56 (41%)
cdx1b	NP_001092232.1	Caudal_act	13..132	CDD:282574	33/167 (20%)
		Homeobox	150..202	CDD:278475	23/51 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910