DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14362 and elm

DIOPT Version :10

Sequence 1:NP_650320.1 Gene:CG14362 / 41695 FlyBaseID:FBgn0038186 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster


Alignment Length:172 Identity:46/172 - (26%)
Similarity:83/172 - (48%) Gaps:8/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LRMNTALSRSQIKYLYIRFHQFSGGGKDPPSHLHKYNFYS-GLLQLNPLLPTILNSMF--GNKVT 84
            ::..|..:.:||:.||.||....   ::....|.:.:... ..|.:|||...|::|.|  .|...
  Fly    17 IQEETGFTPNQIERLYSRFTSLD---RNDCGTLSREDLMRIPELAINPLCERIVHSFFAESNDDR 78

  Fly    85 ITFVDFALFLSTFQAHSLKTSNELKNVMMDKKLRLIFNMYDNNKDGRITKYDLVVVVHKLFSNLL 149
            :.|..|...|:.|:  .|:.:.:.|....::||:..|.|||.:.||.|::.:|:.::|.:....:
  Fly    79 VNFRQFMNVLAHFR--PLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANI 141

  Fly   150 DHVQIMRIVNTIMKEMDHTDSNQIMFQDFCKAFAVFDMTEMM 191
            ...|::.|....:.|.|.....:|.|:|||||....|:.:.|
  Fly   142 SQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKM 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14362NP_650320.1 EF-hand_7 114..182 CDD:463900 21/67 (31%)
elmNP_649568.1 FRQ1 27..174 CDD:444056 42/151 (28%)

Return to query results.
Submit another query.