DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsf2 and AFG2

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_013501.1 Gene:AFG2 / 851113 SGDID:S000004389 Length:780 Species:Saccharomyces cerevisiae


Alignment Length:786 Identity:199/786 - (25%)
Similarity:326/786 - (41%) Gaps:199/786 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VDISPGP-------GLHYIFALEKISGPEL-PLGHVGFSLVQRKWATLSINQEIDVRPYRFDASA 95
            ::|:||.       |.:.|..:.:....|: |:..:..|...|....|.:...:::         
Yeast    61 LEINPGSFCTVGKIGENGILVIARAGDEEVHPVNVITLSTTIRSVGNLILGDRLEL--------- 116

  Fly    96 DIITLVSFETDFLQKKTTTQEPYDS----------------DEMAKEFLMQFAG--MPLTVGQTL 142
                          ||...|.||.:                :|...:.|:..:|  ||..:.|.|
Yeast   117 --------------KKAQVQPPYATKVTVGSLQGYNILECMEEKVIQKLLDDSGVIMPGMIFQNL 167

  Fly   143 VFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNV------RFGRI-------------LGNTVV 188
            ..:..|:   .:.|...:|.|     ||||....:      .:|.:             .|:|.:
Yeast   168 KTKAGDE---SIDVVITDASD-----DSLPDVSQLDLNMDDMYGGLDNLFYLSPPFIFRKGSTHI 224

  Fly   189 QFEK--AENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVE 251
            .|.|  ..|...||               |: ......:||||||..:: :.|....:..|.|..
Yeast   225 TFSKETQANRKYNL---------------PE-PLSYAAVGGLDKEIESL-KSAIEIPLHQPTLFS 272

  Fly   252 QLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEE 316
            ..|:...:||||:||||||||::.|.:....|| ....:|||.|:.||:||:||.:|.:|.||  
Yeast   273 SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNA-HVLTINGPSIVSKYLGETEAALRDIFNEA-- 334

  Fly   317 EEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSG-VHDTVVNQLLAKIDGVEQLNNILVIGMTNR 380
              ::..|:    ||..||||:|...|.:  .:|| |...||..||..:||:.....::||..|||
Yeast   335 --RKYQPS----IIFIDEIDSIAPNRAN--DDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNR 391

  Fly   381 RDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASD---VDNNE---IAAKTK 439
            .:.:|.||.||||.:.::||.:|:...|..||.      :.|::::||   :|:..   ||:||.
Yeast   392 PNSVDPALRRPGRFDQEVEIGIPDVDARFDILT------KQFSRMSSDRHVLDSEAIKYIASKTH 450

  Fly   440 NFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEK--LRVTRADFLHALDNDIKPAFGAAQE 502
            .:.||:|..|.|.:....:.|.:..|:.:       :|  |:||..|...|: .||:|:     .
Yeast   451 GYVGADLTALCRESVMKTIQRGLGTDANI-------DKFSLKVTLKDVESAM-VDIRPS-----A 502

  Fly   503 MLENLLARGIINWG------PPVTELLEDGMLSVQQAKATESSGLVS---VLIEGAPNSGKSALA 558
            |.|..|....:.|.      ...|::.|...|.::.::.....|:.:   ||:.|.|...|:..|
Yeast   503 MREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTA 567

  Fly   559 ANLAQLSDFPFVKVCSPE---DMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVERLLDYGPIG 620
            ..||..|...|:.|..||   ..||.:|.|    ||:||..|..:..|.|..|.::.|   .|  
Yeast   568 KALATESGINFLAVKGPEIFNKYVGESERA----IREIFRKARSAAPSIIFFDEIDAL---SP-- 623

  Fly   621 PRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDVLEEMEMLSAFTSVLHVSNLSTPENVLAVL 685
            .|..:.|..|..||               ||    :|.|::.:.....|:.|:..:.|:.:    
Yeast   624 DRDGSSTSAANHVL---------------TS----LLNEIDGVEELKGVVIVAATNRPDEI---- 665

  Fly   686 DDSDLFSPEELQSIARKMAGKRLCIGIKKLLALIDMIRQSEPHQRVIKFLSKMEEEGGLEM---- 746
             |:.|..|..|.        :.:.:|...:.|.::::::...     ||.:   ||.|:::    
Yeast   666 -DAALLRPGRLD--------RHIYVGPPDVNARLEILKKCTK-----KFNT---EESGVDLHELA 713

  Fly   747 DRVQGH 752
            ||.:|:
Yeast   714 DRTEGY 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 10/57 (18%)
CDC48_2 117..>170 CDD:215011 13/70 (19%)
AAA 259..404 CDD:214640 61/145 (42%)
AAA 261..402 CDD:278434 60/141 (43%)
AAA 543..674 CDD:214640 38/136 (28%)
P-loop_NTPase 544..>613 CDD:304359 25/71 (35%)
AFG2NP_013501.1 CDC48 51..773 CDD:273521 199/786 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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