DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and RIX7

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_013066.1 Gene:RIX7 / 850625 SGDID:S000003957 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:442 Identity:130/442 - (29%)
Similarity:195/442 - (44%) Gaps:103/442 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 FDASADIITLVSFETDFLQKKTTTQEPYDSDE----------------MAKEFLMQFAGMPLTVG 139
            |...|:|.:..:..||..:......|..:.||                :.::|:..:. .||:..
Yeast   433 FQTYANIKSTPTTATDSSEDNMEIDETANGDESSLKNTANMIDPLPLSVVQQFIRNYP-EPLSGE 496

  Fly   140 QTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRS 204
            |..:...|.:.||    |.|..:.|....:......:|.:..:.....|:.|      ||:    
Yeast   497 QLSLLSIKYEDFL----KALPTIQPTAKREGFATVPDVTWANVGALQRVRLE------LNM---- 547

  Fly   205 KGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGT 269
                   :|:.|                           :..|||.|::||....|:||:||||.
Yeast   548 -------AIVQP---------------------------IKRPELYEKVGISAPGGVLLWGPPGC 578

  Fly   270 GKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHII 330
            ||||:|:.:     |.|.:.    :.||::|:|||||||.:||::|..|..        |...:|
Yeast   579 GKTLLAKAV-----ANESRANFISIKGPELLNKYVGESERSIRQVFTRARA--------SVPCVI 630

  Fly   331 IFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLE 395
            .|||:||:...|.:....|.  ..|||.||.::||:.....|.|||.|||.||||.|:||||||:
Yeast   631 FFDELDALVPRRDTSLSESS--SRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLD 693

  Fly   396 VQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIA--AKTKNFSGAELEGLVRAAQSTAM 458
            ..:.|.|||.:.::.|:...||  .....::||||..||.  .|..|||||:|..|||.:...|:
Yeast   694 KSLFIELPNTEEKLDIIKTLTK--SHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLAL 756

  Fly   459 NRLIKADSKVH------VDPE--------AMEKLRVTRADFLHALDNDIKPA 496
            .|......::.      :|.|        :.|::.||.:||..|| ..|||:
Yeast   757 KRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSAL-RKIKPS 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011 12/68 (18%)
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 68/179 (38%)
CDC48 <225..>611 CDD:273521 105/292 (36%)
RIX7NP_013066.1 CDC48 <192..824 CDD:273521 130/442 (29%)
Blue background indicates that the domain is not in the aligned region.

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