DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and ATAD1

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_001308896.1 Gene:ATAD1 / 84896 HGNCID:25903 Length:361 Species:Homo sapiens


Alignment Length:383 Identity:95/383 - (24%)
Similarity:163/383 - (42%) Gaps:98/383 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKI------VRQSIINP- 216
            ::|:||         ||..:         |:.:|....::...|....|:      :...:::| 
Human    38 VDAIDP---------TRKQK---------VEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPL 84

  Fly   217 ----DWDFGKMGIGGLDK-------------EFNAIFRRAFASRVFPPELVEQLGIKHVKGILLY 264
                .|.    .|.|||.             :...:|..   ||:..|.          ||:|||
Human    85 NMHVTWS----DIAGLDDVITDLKDTVILPIKKKHLFEN---SRLLQPP----------KGVLLY 132

  Fly   265 GPPGTGKTLMARQIGTMLNAREP--KIVN-GPQIL-DKYVGESEANIRRLFAEAEEEEKRLGPNS 325
            ||||.||||:|:     ..|:|.  :.:| .|..| ||:.|||:.....:|:.|    .:|.|: 
Human   133 GPPGCGKTLIAK-----ATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLA----IKLQPS- 187

  Fly   326 GLHIIIFDEIDAICKARGSVAGNSGVHDTVV---NQLLAKIDGVEQLNN--ILVIGMTNRRDMID 385
               ||..||||:..:.|     :|..|:...   .|.::..||::..::  ::|:|.|||...:|
Human   188 ---IIFIDEIDSFLRNR-----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLD 244

  Fly   386 EALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLV 450
            .|::|  |:..:..|:.|..:.|..||.:..|.    ..:...||..|:|.:|..|||::|:.:.
Human   245 SAIMR--RMPTRFHINQPALKQREAILKLILKN----ENVDRHVDLLEVAQETDGFSGSDLKEMC 303

  Fly   451 RAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLL 508
            |.|....:...:.:.|:...|.   :::|..:...||.....:|.:..||   .:|:|
Human   304 RDAALLCVREYVNSTSEESHDE---DEIRPVQQQDLHRAIEKMKKSKDAA---FQNVL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011 3/10 (30%)
AAA 259..404 CDD:214640 50/153 (33%)
AAA 261..402 CDD:278434 48/149 (32%)
AAA 543..674 CDD:214640
P-loop_NTPase 544..>613 CDD:304359
ATAD1NP_001308896.1 RecA-like_ATAD1 92..257 CDD:410928 57/197 (29%)
AAA_lid_3 282..321 CDD:407720 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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