Protein Alignment Nsf2 and AT4G24710

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: NP_194202.4
• Gene: AT4G24710 / 828573
• AraportID: AT4G24710
• Length: 479
• Species: Arabidopsis thaliana
• Alignment Length: 268
• Identity: 68/268 - (25%)
• Similarity: 124/268 - (46%)
• Gaps: 54/268 - (20%)

  Fly   230 KEFNAIF--------------RRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKT----LMAR 276
            |||:.::              |.|.::.:|..:.|....:...:.|||:||||||||    .:|:
plant   172 KEFDGLWESLIYESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQ 236

  Fly   277 QIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFAEAEE--EEKRLGPNSGLHIIIFDEI 335
            ::....|:|.|..    ||...:..|:..||...:.:||.:.:|  ||     :..|..::.||:
plant   237 KLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEE-----DGNLVFVLIDEV 296

  Fly   336 DAICKARGSVAGNSGVHDT--VVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 398
            :::..||.:....|...|:  |||.||.::|.::...|::::..:|....||.|.:  .|.:::.
plant   297 ESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVIILTTSNITTAIDVAFV--DRADIKA 359

  Fly   399 EISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAK--TKNFSGAELEGLVRAAQSTAMNRL 461
            .:..|....|.:||.             |.|:  |:.:|  ..:|.|.  :||...:.|:...:|
plant   360 YVGPPTLHVRYEILR-------------SCVE--ELISKGIISSFQGC--DGLSIPSFSSLKEKL 407

  Fly   462 IKADSKVH 469
              ::|:||
plant   408 --SESEVH 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012
		CDC48_2	117..>170	CDD:215011
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	51/195 (26%)
		CDC48	<225..>611	CDD:273521	68/268 (25%)
AT4G24710	NP_194202.4	RecA-like_Pch2-like	163..361	CDD:410916	51/195 (26%)