Protein Alignment Nsf2 and AT3G27120

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: NP_001319654.1
• Gene: AT3G27120 / 822331
• AraportID: AT3G27120
• Length: 680
• Species: Arabidopsis thaliana
• Alignment Length: 494
• Identity: 120/494 - (24%)
• Similarity: 205/494 - (41%)
• Gaps: 116/494 - (23%)

  Fly    67 GFSLVQRKWATLSINQEIDVR----PYRFDASADIITLVSFETDFLQKKTTTQEP-------YDS 120
            ||...:....|.|:..:.:|:    |..|     :...:..|.|..||:.:|:.|       .|.
plant   249 GFGTKRPHAETSSLANDGEVKEDGAPNGF-----VSAKIKLEMDVRQKRGSTESPSSCLSPQSDK 308

  Fly   121 DEMAKEFLMQFAGM----------PLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRT--------- 166
            :.:.:.:..:..|:          |:......|.....:    :..||.:|:|..|
plant   309 NALGRGYGSRSGGLRRGYRSNFVPPVKTNGNNVGNLTSR----IGGKTDDALDDSTRTCLEMLCG 369

  Fly   167 -VGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGLDK 230
             .|:...|.||:. .|::       |...|.:::...            |..||    .|.||:.
plant   370 PDGELPEKLRNLE-PRLI-------EHVSNEIMDRDP------------NVRWD----DIAGLEH 410

  Fly   231 EFNAIFRRAFASRVFP---PELVEQLGIKHV-KGILLYGPPGTGKTLMARQIGTMLNAREPK--- 288
            ....:....    ::|   |::.:  |.:.. ||:||:||||||||::.:.|     |.|.|
plant   411 AKKCVTEMV----IWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIGKAI-----AGEAKATF 464

  Fly   289 -IVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVH 352
             .::...:..|::||.|..:|.||..|...:..        :|..||||::...|.|    .|.|
plant   465 FYISASSLTSKWIGEGEKLVRALFGVASCRQPA--------VIFVDEIDSLLSQRKS----DGEH 517

  Fly   353 DT---VVNQLLAKIDGVEQ-LNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILN 413
            ::   :..|.|.:::|.:. ...||:||.|||...:|||..|  ||..::.|.||:.:.|..|:.
plant   518 ESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQ 580

  Fly   414 IHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKL 478
            ...|:...|.  .||.|.|.|...|:.:||::::.||:.|....:...:|..  :.:.....:.:
plant   581 NLLKKDGLFT--LSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRG--IDITNLTKDDM 641

  Fly   479 R-VTRADFLHALDNDIKPAFGAAQEMLENLLARGII-NW 515
            | ||..||..|| .:::|:      :.:|.|  ||. ||
plant   642 RLVTLQDFKDAL-QEVRPS------VSQNEL--GIYENW 671

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012	5/25 (20%)
		CDC48_2	117..>170	CDD:215011	11/79 (14%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	55/187 (29%)
		CDC48	<225..>611	CDD:273521	88/305 (29%)
AT3G27120	NP_001319654.1	P-loop containing Nucleoside Triphosphate Hydrolases	382..567	CDD:476819	61/233 (26%)
		AAA_lid_3	593..>628	CDD:465537	10/34 (29%)
		Vps4_C	<644..676	CDD:462762	13/37 (35%)