Protein Alignment Nsf2 and AT2G45500

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: NP_001323445.1
• Gene: AT2G45500 / 819158
• AraportID: AT2G45500
• Length: 497
• Species: Arabidopsis thaliana
• Alignment Length: 540
• Identity: 117/540 - (21%)
• Similarity: 209/540 - (38%)
• Gaps: 161/540 - (29%)

  Fly     4 EKAHRMRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFA---------LEKISGP 59
            |.|..:||     :|..|.:.|:::..:....:.....:|.|.  ||.:         .||||..
plant    72 EIAKGVRA-----EEWGLHDDALLHYRNAQRIMNEATSTPSPS--YISSSEKEKVRSYREKISNW 129

  Fly    60 ELPLGHVGFSLVQRKWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKT--------TTQE 116
            :        :.|..:...|.:....:.|...:.:||.:.:..|.....|.:||        |.:.
plant   130 Q--------NQVSERLQALGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGGVATPRN 186

  Fly   117 PYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGR 181
            |.|:                                        |..|:.|.:|         |.
plant   187 PKDA----------------------------------------AASPKPVKES---------GN 202

  Fly   182 ILGNTVVQFEKAENSVLNLQGRSKGKIVRQSIINPD----WDFGKMGIGGLDKEFNAIFRRAFAS 242
            :..:.:|:                  ::..:|::..    ||    .:.||:..     ::|...
plant   203 VYDDKLVE------------------MINTTIVDRSPSVKWD----DVAGLNGA-----KQALLE 240

  Fly   243 RVFPPELVEQL--GIKH-VKGILLYGPPGTGKTLMARQI-----GTMLNAREPKIVNGPQILDKY 299
            .|..|.....|  |::. .:|:||:||||.|||::|:.:     .|..|      |:...:..|:
plant   241 MVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFN------VSASSLTSKW 299

  Fly   300 VGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKID 364
            |||:|..::.||..|...:    |:    :|..||||:|...| |.:.|.... .:.::.|.:.|
plant   300 VGEAEKLVKTLFQVAISRQ----PS----VIFMDEIDSIMSTR-STSENEASR-RLKSEFLIQFD 354

  Fly   365 GVEQLNN--ILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIAS 427
            ||....:  :::||.||:...:|:|:||  ||..::.:.||:  ..|:.|...||.....:.: |
plant   355 GVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPD--SNVRKLLFKTKLKCQPHSL-S 414

  Fly   428 DVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRL------IKADSKVHVDPEAMEKLRVTRADFL 486
            |.|.::|..:|:.:||::|:.|...|....:..|      |:|:           |:|..|.|..
plant   415 DGDIDKIVKETEGYSGSDLQALCEEAAMMPIRELGANILTIQAN-----------KVRSLRYDDF 468

  Fly   487 HALDNDIKPAFGAAQ-EMLE 505
            ......|:|:...:: |.||
plant   469 RKSMAVIRPSLSKSKWEELE 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012	16/88 (18%)
		CDC48_2	117..>170	CDD:215011	5/52 (10%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	53/185 (29%)
		CDC48	<225..>611	CDD:273521	81/298 (27%)
AT2G45500	NP_001323445.1	MIT_spastin	62..140	CDD:239142	16/82 (20%)
		RecA-like_spastin	227..390	CDD:410932	53/185 (29%)
		AAA_lid_3	417..452	CDD:465537	9/34 (26%)
		Vps4_C	<455..495	CDD:462762	11/45 (24%)