DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and DRC11

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_001257514.1 Gene:DRC11 / 79781 HGNCID:26195 Length:830 Species:Homo sapiens


Alignment Length:286 Identity:52/286 - (18%)
Similarity:97/286 - (33%) Gaps:90/286 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 VKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLG 322
            ||.:||.||.|.||.::...|.|...|....: :...|..||.|:                    
Human   576 VKSLLLAGPSGVGKKMLVHAICTETGANLFNL-SSSNIAGKYPGK-------------------- 619

  Fly   323 PNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLN----------------- 370
              :||.:::........:.:.||.   .:.|| ......|:...|::|                 
Human   620 --NGLQMMLHAVFKVARQLQPSVV---WIEDT-EKTFYKKVPNAEKMNEPKRLKKHLPQILKLLK 678

  Fly   371 ---NILVIGMTNRRDMIDEALLRPGRLEVQ---------MEISLPNEQGRV----QILNIHTKRM 419
               .||::|.|.          ||...|:|         :.:..|:...|.    ||:.      
Human   679 PDDRILIVGTTR----------RPFDAELQSFCKVYQKIILVPRPDYASRYVLWKQIIE------ 727

  Fly   420 RDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRAD 484
            |:...:.|.::.:.:|..|..|:...:..:|:...:....|     .::|..        :|..:
Human   728 RNGGVLTSALNVSCLAKVTDGFTQGHIVEVVKGVLTDQRIR-----RQIHKP--------LTAVE 779

  Fly   485 FLHALDNDIKPAFGAAQEMLENLLAR 510
            |:.|: ..:.|.:...:|..:|..|:
Human   780 FITAI-TSMNPVYKEEEESFKNWYAK 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 33/170 (19%)
CDC48 <225..>611 CDD:273521 52/286 (18%)
DRC11NP_001257514.1 RecA-like_IQCA1 551..710 CDD:410914 33/170 (19%)
Blue background indicates that the domain is not in the aligned region.

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