Protein Alignment Nsf2 and pex6

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: XP_001332652.6
• Gene: pex6 / 792998
• ZFINID: ZDB-GENE-081104-252
• Length: 1071
• Species: Danio rerio
• Alignment Length: 442
• Identity: 119/442 - (26%)
• Similarity: 206/442 - (46%)
• Gaps: 108/442 - (24%)

  Fly   134 MPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKT----RNVRFGRI--------LGNT 186
            :|..|....|.|        :|:::|.....|||..||.:.    ::|..|||        ||:.
Zfish   670 LPSDVMAAFVHQ--------VAIESLSEDQRRTVLSSLSEDLLLGKDVNLGRIAKQTAGFVLGDL 726

  Fly   187 VVQFEKAENSVLNLQGRSKGKIVRQSII----------NPDWDFGKMGIGGLDKEFNA---IFRR 238
            ......|            ||...:.::          ..:.|....|:....::|:|   :.:.
Zfish   727 CALLTNA------------GKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQE 779

  Fly   239 AFASRVFPP------------------ELVE--QLGIKHVK---------GILLYGPPGTGKTLM 274
            |.:..:..|                  |:::  ||.::|.:         |:||||||||||||:
Zfish   780 AHSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLRRSGLLLYGPPGTGKTLL 844

  Fly   275 ARQIG-----TMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDE 334
            |:.:.     |.|:      |.||::::.|||:||.|||::|::|.        ::...||.|||
Zfish   845 AKAVATECTMTFLS------VKGPELINMYVGQSEENIRQVFSKAR--------SAAPCIIFFDE 895

  Fly   335 IDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQME 399
            :|::...||....:.||.|.||:||||::||:....::.|||.|||.|::|::||||||.:..:.
Zfish   896 LDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVY 960

  Fly   400 ISLPNE--QGRVQILNIHTKRMR-DFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRL 461
            :.: ||  :.::|:|....::.: |.:...||:    :.:.....:||:|..|...|...|:.|.
Zfish   961 VGI-NEDRESQLQVLKAILRKFKVDASVCLSDI----VESCPPRLTGADLYSLCSDAMMCAVKRK 1020

  Fly   462 IKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQ----EMLENLLA 509
            |...:: .||.| :..|.:...||..|| :.::|:....|    ::|:..|:
Zfish  1021 ISRITE-GVDSE-LSSLTLCSEDFSEAL-SGLQPSVSEQQISRYQLLQQKLS 1069

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012
		CDC48_2	117..>170	CDD:215011	9/35 (26%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	71/212 (33%)
		CDC48	<225..>611	CDD:273521	97/329 (29%)
pex6	XP_001332652.6	None