DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsf2 and nsf

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_012808037.1 Gene:nsf / 780249 XenbaseID:XB-GENE-5936011 Length:746 Species:Xenopus tropicalis


Alignment Length:742 Identity:465/742 - (62%)
Similarity:581/742 - (78%) Gaps:6/742 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQR 73
            |:|.:|||||||:||.|:||..|| :..::|::...|...|||.: |.....|| |.:.|||.||
 Frog     6 MQAARCPTDELSITNCAVVNEKDF-QSGQHVNVRTSPNHRYIFTV-KTHHTILP-GSIAFSLPQR 67

  Fly    74 KWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTV 138
            |||.|||.|:::|..|.||.:...|..::.|.||||||:....|||:|.||.||:.||.....:|
 Frog    68 KWAGLSIGQDVEVGVYTFDKTKQCIGTMTIEIDFLQKKSIDSNPYDTDRMAAEFIQQFNNQAFSV 132

  Fly   139 GQTLVFQFKDKKFLGLAVKTLEAVDPRTV-GD-SLPKTRNVRFGRILGNTVVQFEKAENSVLNLQ 201
            ||.|||.|.||.| ||.||.:||:||..: |: |..|.:.:..|.::||:.|.||||::|.|||.
 Frog   133 GQQLVFSFNDKLF-GLVVKDIEAMDPSILKGEQSTGKRQKIEVGLVVGNSQVVFEKADSSSLNLT 196

  Fly   202 GRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGP 266
            |:||.:..|||||||||:|.|||||||||||:.||||||||||||||:|||:|.||||||||:||
 Frog   197 GKSKTRQDRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLFGP 261

  Fly   267 PGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIII 331
            ||.||||||||||.||||||||:||||:||:|||||||||||:|||:||||::|||.||||||||
 Frog   262 PGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIII 326

  Fly   332 FDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEV 396
            |||||||||.|||:||::|||||||||||:|||||||||||||||||||.|:|||||||||||||
 Frog   327 FDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEV 391

  Fly   397 QMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRL 461
            :|||.||:|:||:|||:|||.|||:.:.::||||..|:|.:|||||||||||||||||||||||.
 Frog   392 KMEIGLPDEKGRLQILHIHTARMREHSLLSSDVDVGELAQETKNFSGAELEGLVRAAQSTAMNRH 456

  Fly   462 IKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDG 526
            |||.:||.||.|..|:|:||:.||..:|.||||||||..||...:.:..|||.||.|||.:|:||
 Frog   457 IKATNKVEVDMEKAERLQVTKGDFFTSLGNDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDG 521

  Fly   527 MLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIR 591
            .|.|||.|.::.:.|||||:||.|:|||:||||.:::.|:|||:|:||||.|:||:|:|||..|:
 Frog   522 ELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKISEESNFPFIKICSPEKMIGFSETAKCQAIK 586

  Fly   592 KIFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDV 656
            |||:|||:|.|||:|||::||||||.|||||:|||.||||||||||.||:||||||:.|:||:||
 Frog   587 KIFEDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDV 651

  Fly   657 LEEMEMLSAFTSVLHVSNLSTPENVLAVLDDSDLFSPEELQSIARKMAGKRLCIGIKKLLALIDM 721
            |:|||||.||::.:.|.|:.|.|.::..|:....|...|...||:::.||::.|||||||.||:|
 Frog   652 LQEMEMLDAFSTTIRVPNIVTGEQLMEALELLGGFKDNERSVIAQQVKGKKVYIGIKKLLMLIEM 716

  Fly   722 IRQSEPHQRVIKFLSKMEEEGGLEMDR 748
            ..|.:|..||.|||:.::||....:.|
 Frog   717 SMQMDPEYRVSKFLALLKEEAAEPVHR 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 38/79 (48%)
CDC48_2 117..>170 CDD:215011 29/54 (54%)
AAA 259..404 CDD:214640 124/144 (86%)
AAA 261..402 CDD:278434 121/140 (86%)
AAA 543..674 CDD:214640 89/130 (68%)
P-loop_NTPase 544..>613 CDD:304359 43/68 (63%)
nsfXP_012808037.1 CDC48_N 5..84 CDD:376770 38/80 (48%)
CDC48_2 111..183 CDD:215011 34/72 (47%)
CDC48 <211..>606 CDD:273521 288/394 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2110
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4502
Inparanoid 1 1.050 892 1.000 Inparanoid score I385
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D156590at33208
OrthoFinder 1 1.000 - - FOG0003053
OrthoInspector 1 1.000 - - otm48046
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1308
SonicParanoid 1 1.000 - - X2410
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

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