DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and Pex1

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_001280735.1 Gene:Pex1 / 71382 MGIID:1918632 Length:1284 Species:Mus musculus


Alignment Length:506 Identity:148/506 - (29%)
Similarity:217/506 - (42%) Gaps:95/506 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 TVVQFEKAENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELV 250
            |...|:||      |:|.....:...::..|. |.|...|||| .|...|...........|||.
Mouse   811 TTSDFQKA------LRGFLPASLRNVNLHKPR-DLGWDKIGGL-HEVRQILMDTIQLPAKYPELF 867

  Fly   251 EQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLF 311
            ..|.|:...||||||||||||||:|..:     |||..:    :.||::|.||:|.||..:|.:|
Mouse   868 ANLPIRQRTGILLYGPPGTGKTLLAGVV-----ARESGMNFISIKGPELLSKYIGASEQAVRDVF 927

  Fly   312 AEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIG 376
            ..|:..:.        .|:.|||.::|...||.  .|:||.|.||||||.::||||.|..:.|:.
Mouse   928 IRAQAAKP--------CILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLA 982

  Fly   377 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNF 441
            .|:|.|:||.||||||||:..:....|::..|::||.:.:|.:    .:|.|||...:|:.|.:|
Mouse   983 ATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSL----ALADDVDLQHVASVTDSF 1043

  Fly   442 SGAELEGLVRAAQSTAM-NRLIKA---DSKVHVDPEAMEKLRVTRADFL-HALDNDIKPAFG--- 498
            :||:|:.|:..||..|: .||:.:   |.....|.:    |.::...|| |:..:|.....|   
Mouse  1044 TGADLKALLYNAQLEALQGRLLPSGLPDGGSSSDSD----LSLSSMVFLNHSSGSDDSAGDGECG 1104

  Fly   499 -----AAQEMLENLLARGIIN-----WGPPVTELLEDGMLSVQQAKATESSGLVSVLIEGAPNSG 553
                 .:.||.|.|......|     :|......|.:|..|...:....:...|:..:..||  |
Mouse  1105 LEQSLLSLEMSEILPDESKFNMYRLYFGSSYESELGNGTPSDLSSHCLSAPSSVTQDLPAAP--G 1167

  Fly   554 KSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCI------VVDNVER 612
            |..|      .:..|..:..|.|.....|:..:         |..|:.:|.|      .....|.
Mouse  1168 KDPL------FTQHPVFRTPSQEGCQDLTQEQR---------DQLRAEISIIKGRYRSQSGEDES 1217

  Fly   613 LLDYGPIGPRYSNLTLQALLVLLKKQP-------------------PKGRK 644
            |...|||...::......:..|...:|                   ||.||
Mouse  1218 LNQPGPIKTTFAISQAHLMTALAHTRPSISEDEGKEFAELYENFQNPKKRK 1268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
AAA 259..404 CDD:214640 65/148 (44%)
AAA 261..402 CDD:278434 64/144 (44%)
AAA 543..674 CDD:214640 24/127 (19%)
P-loop_NTPase 544..>613 CDD:304359 14/74 (19%)
Pex1NP_001280735.1 PEX-2N 19..98 CDD:286362
PEX-1N 104..179 CDD:286361
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..373
AAA 592..742 CDD:214640
AAA 596..725 CDD:278434
AAA 878..1010 CDD:214640 64/146 (44%)
AAA 878..1007 CDD:278434 64/143 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1261..1284 4/8 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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