DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and fignl2

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_001201837.1 Gene:fignl2 / 561837 ZFINID:ZDB-GENE-090313-189 Length:684 Species:Danio rerio


Alignment Length:440 Identity:86/440 - (19%)
Similarity:160/440 - (36%) Gaps:122/440 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LQKK----TTTQEPYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVG 168
            |::|    |..:|..||....|     ::..|:..|....:...||...|...   .:.||:...
Zfish   283 LKRKAFEMTLDEEDSDSSRYRK-----YSYDPMKTGGDSPYGVTDKAGNGFGT---GSTDPQGFK 339

  Fly   169 DSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKIV-RQSIINPDWDFGKMG-------- 224
            .|.|.:::                      :|:|...||.. .:.:::|  .:|..|        
Zfish   340 PSKPSSQS----------------------SLEGDEVGKYSGLKPLVSP--TYGAAGDYSPPAAM 380

  Fly   225 ---IGGLDKEF--NAIFRRAFASRVFPPELVEQL-----------------GIKHVKG------- 260
               .||.::.|  |...:|:...:...|.::|.:                 |..|:|.       
Zfish   381 TGENGGAEQGFSQNRSQKRSDPMKSIEPRMLELVSRELQDCSPAMLWTELAGNCHIKAALEEDLL 445

  Fly   261 ---------------ILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRL 310
                           |||:||.|.|||.:||.:.:.:.|...:: :...:..|..||:|..:..|
Zfish   446 WPVLRPNPAIHPPKTILLFGPQGGGKTTLARSLSSQIGASFYRL-SCATLASKLKGEAEQLLLTL 509

  Fly   311 FAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVE--QLNNIL 373
            |:.|...:..:        ::..|::||            ..:.:..||.|:::.::  |.|..|
Zfish   510 FSVATARQPAM--------VLLSEVEAI------------EEEGLRQQLQAQLEKIQHNQSNQFL 554

  Fly   374 VIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKT 438
            |:..|.|.|:|.::|||  ....:..|.||:...|..:|      ::........:...|::|..
Zfish   555 VVCTTRRPDLIKDSLLR--CFSKRYHIGLPDGNTRRHVL------LQALAPQGCSLSERELSAVL 611

  Fly   439 KNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADFLHA 488
            :...|..:..|::..|....:....|...:|..|.::..  .|..||.:|
Zfish   612 QRSEGFSVWELLQLCQQALASASASASVPLHSLPASLSS--PTLQDFENA 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011 10/52 (19%)
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 47/229 (21%)
CDC48 <225..>611 CDD:273521 63/307 (21%)
fignl2NP_001201837.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..48
PHA03247 <86..287 CDD:223021 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..179
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..403 25/142 (18%)
P-loop containing Nucleoside Triphosphate Hydrolases 429..579 CDD:476819 39/172 (23%)
Blue background indicates that the domain is not in the aligned region.

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