DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and zgc:153738

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_001073437.3 Gene:zgc:153738 / 558115 ZFINID:ZDB-GENE-061013-622 Length:818 Species:Danio rerio


Alignment Length:603 Identity:122/603 - (20%)
Similarity:203/603 - (33%) Gaps:171/603 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKAHRMRAIKCPTDELSLTNKAIVNVSDFTEEV---KYVDISPGPGLHYIFALEKISGPELPLGH 65
            ||.....|.:....|....||......|..|:.   |..|....|||.   .|.....|:|...|
Zfish   330 EKTPEELAEELAAKEEEDANKNPKGKEDTKEKAKKGKIEDEEEEPGLK---MLPSACLPDLERSH 391

  Fly    66 VGFSLV-QRKWATLSINQEIDVRPYRFDASADIITLVSFETDFL--QKKTTTQEPYDSDEMAKEF 127
            ..:|.| :.:..:.:.:|..::...:.|...:|...:..:.|.|  |:....:...|.::..|  
Zfish   392 KTYSEVWKNRNESKNFSQRHELELIKEDKRKEIEVEIRKQVDELMRQELANWKLAVDKEKSGK-- 454

  Fly   128 LMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTV-GDSLPKTRNVRFGRILGNTVVQFE 191
             ::.|.......::...:.|||..  .|.:|.|::....| .:.|.|..||:....||       
Zfish   455 -VKGAAKKKKASKSAKRKKKDKDL--TADRTTESLFEELVEQELLKKPENVKLKDYLG------- 509

  Fly   192 KAENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIK 256
              :.|.|       |..:|||.|.|......:             |:..|.....|     ||.:
Zfish   510 --DYSYL-------GTTLRQSDIEPMPSLSDV-------------RQVVALYAILP-----LGSQ 547

  Fly   257 --H-----VKGILLYGPPGTGKTLMARQI----GTMLNAREPKIV-------NG----------- 292
              |     ||.|||.||.|.||.::...|    |..|....|..|       ||           
Zfish   548 AVHEKSPLVKTILLVGPSGVGKKMLVHAICQETGANLFDLSPLNVAKKYPGRNGLQMMLHLVFKV 612

  Fly   293 -----PQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKA-RGS-----VA 346
                 |.::  ::|::|   :..:.:..:|||.|.|..     :..::..|.|: ||.     |.
Zfish   613 ARLMQPSVI--WIGDAE---KMFYRKVPKEEKELDPKR-----LKKDLPKILKSIRGEDCVLIVG 667

  Fly   347 GNSGVHDTVVNQLLAKIDGVEQLNNILVI---GMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 408
            ..|..|...:..|      .:..|.|::|   ...:|..|..|.:.:.|                
Zfish   668 TTSDPHSADLKSL------CKFYNKIILIPRPDYASRYVMWKELIKKNG---------------- 710

  Fly   409 VQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPE 473
                          .::..|:|.:.:|..:..::...:..:||:         |..:.::...| 
Zfish   711 --------------GEVTGDLDLSSLAKISDGYTQGHMVQVVRS---------ILTERRIQQFP- 751

  Fly   474 AMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATES 538
               |..:|.::|:..|.. |.|.|...:|.|:|..|:         |.|   |...::.|...|.
Zfish   752 ---KRPLTASEFVSPLAR-IDPVFQEEEEALKNWYAK---------TPL---GKKRIKAASGKEG 800

  Fly   539 SGLVSVLIEGAPNSGKSA 556
            .       |..|.:|..|
Zfish   801 D-------EEPPKTGGKA 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 18/83 (22%)
CDC48_2 117..>170 CDD:215011 10/53 (19%)
AAA 259..404 CDD:214640 39/180 (22%)
AAA 261..402 CDD:278434 38/176 (22%)
AAA 543..674 CDD:214640 4/14 (29%)
P-loop_NTPase 544..>613 CDD:304359 4/13 (31%)
zgc:153738NP_001073437.3 SpoVK <557..769 CDD:223540 51/271 (19%)
AAA 559..692 CDD:278434 34/148 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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