DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and drc11

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_073809094.1 Gene:drc11 / 553364 ZFINID:ZDB-GENE-050208-768 Length:846 Species:Danio rerio


Alignment Length:398 Identity:75/398 - (18%)
Similarity:149/398 - (37%) Gaps:101/398 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 MIDEALLRPGRLEVQMEISLPN-----EQGRVQIL----NIHTKRMRDFNKIASDVDNNEIAAKT 438
            |:|.|   .|.||..:|...|.     ::.|:|:.    ....:.|:.|..: .:|.:..:..:.
Zfish     9 MLDAA---QGALEDLLEDEYPTLELRPQKDRLQVFQTLATFFLRYMKIFRAL-EEVYDQIVHPQK 69

  Fly   439 KNFSGAELEGLVRAAQSTAMNRLIK--------ADSKVHVDPEAMEKLRVTRADFLHALDNDIKP 495
            :......|:|:        |.||::        ..|:.|...:.::..::|..|    |:..| |
Zfish    70 RRVVHQVLDGV--------MGRLVELKNEMVELEHSEFHYFDDLLQDFKMTPED----LEVPI-P 121

  Fly   496 AFGAAQEM-----LENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLVSVLIEGAPNSGKS 555
            .:...::|     .|.:||..:...|.|..:.:...:||:...:|.       .|::.:..:.:.
Zfish   122 RYFVREKMRALKEREKMLAHVLAKEGRPEHKSVNRPVLSMSMERAV-------WLLQVSERARQG 179

  Fly   556 ALAANLAQLSDFPFVKVCSPED--------MVGFTESAKCLHIRKI---FDDAYRSTLSCIVVDN 609
            .|.|:        |:|....|:        |:...::|.|  |:|:   :.|..|....|:    
Zfish   180 RLRAH--------FMKTIRLEEQRRHLGSSMLDPDQAATC--IQKVWRGYRDRRRVNKECL---- 230

  Fly   610 VERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDVLEEMEMLSAFTSVLHVSN 674
             |.::..|              ::..::|.|...:|.......||.:::|.......|:::::. 
Zfish   231 -EEMIFLG--------------MIPAQQQTPSPAQLRAQQVERRRHIIQEEHEAEYQTALVNIK- 279

  Fly   675 LSTPENVLAVLDDSDLFSPEELQSIARK-------MAGKRLCIGIKKLLALIDMIRQSEPHQRVI 732
                |:|..| |.:|:  .|.||...|:       .:||.......:......:..|..|.|...
Zfish   280 ----ESVRTV-DGADI--KESLQEQIRQWFLECRDASGKFPDFPSPEDGGSASIFAQKTPEQVAA 337

  Fly   733 KFLSKMEE 740
            :|.:|.||
Zfish   338 EFAAKEEE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 6/16 (38%)
CDC48 <225..>611 CDD:273521 48/260 (18%)
drc11XP_073809094.1 None
Blue background indicates that the domain is not in the aligned region.

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