DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and PEX6

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_000278.3 Gene:PEX6 / 5190 HGNCID:8859 Length:980 Species:Homo sapiens


Alignment Length:492 Identity:133/492 - (27%)
Similarity:213/492 - (43%) Gaps:129/492 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FTEEVKYVDISPGPGLHYIFALEKISGPELPLG-HVGFSLVQRKWATLSINQEIDVRPYRFDASA 95
            |..|::...:|.|..|..:.||.    ..|||| .|..:.:.|:.|...:              .
Human   587 FPHELEVPALSEGQRLSILRALT----AHLPLGQEVNLAQLARRCAGFVV--------------G 633

  Fly    96 DIITLVSFETDFLQKKT--------TTQEPYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFL 152
            |:..|::..:.....:.        .|:|  |..|:..      ||.||     |...|      
Human   634 DLYALLTHSSRAACTRIKNSGLAGGLTEE--DEGELCA------AGFPL-----LAEDF------ 679

  Fly   153 GLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKIVRQSIINPD 217
            |.|::.|:....:.||  .||..:|.:..:.|...|:.|..|...|.|:                
Human   680 GQALEQLQTAHSQAVG--APKIPSVSWHDVGGLQEVKKEILETIQLPLE---------------- 726

  Fly   218 WDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTML 282
                                        .|||: .||::. .|:||:|||||||||:|:.:.|  
Human   727 ----------------------------HPELL-SLGLRR-SGLLLHGPPGTGKTLLAKAVAT-- 759

  Fly   283 NAREPKI----VNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARG 343
               |..:    |.||::::.|||:||.|:|.:||.|    :...|    .||.|||:|::..:||
Human   760 ---ECSLTFLSVKGPELINMYVGQSEENVREVFARA----RAAAP----CIIFFDELDSLAPSRG 813

  Fly   344 SVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQ-G 407
            ....:.||.|.||:||||::||:....::.|||.|||.|::|.|||||||.:..:.:....:: .
Human   814 RSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRAS 878

  Fly   408 RVQILNIHTKRMRDFNKIASDVD-NNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVD 471
            ::::|:..|::.    |:...|. .|.:.......:||:|..|...|.:.|:.|      :||..
Human   879 QLRVLSAITRKF----KLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKR------RVHDL 933

  Fly   472 PEAME----KLRVTRADFLHALDNDIKPAFGAAQEML 504
            .|.:|    .|.:|..|.|.|... ::|:. :.||:|
Human   934 EEGLEPGSSALMLTMEDLLQAAAR-LQPSV-SEQELL 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 14/57 (25%)
CDC48_2 117..>170 CDD:215011 13/52 (25%)
AAA 259..404 CDD:214640 63/148 (43%)
AAA 261..402 CDD:278434 62/144 (43%)
AAA 543..674 CDD:214640
P-loop_NTPase 544..>613 CDD:304359
PEX6NP_000278.3 SpoVK 463..967 CDD:223540 131/489 (27%)
AAA 466..594 CDD:278434 2/6 (33%)
AAA 743..871 CDD:278434 60/140 (43%)
Vps4_C 918..977 CDD:286426 16/59 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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