Sequence 1: | NP_001287318.1 | Gene: | Nsf2 / 41694 | FlyBaseID: | FBgn0266464 | Length: | 752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
Alignment Length: | 338 | Identity: | 97/338 - (28%) |
---|---|---|---|
Similarity: | 154/338 - (45%) | Gaps: | 59/338 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 PKTRNVRFGRILGNTVVQFEKAENSVLNLQGRS----KGKIVRQSIINPDWDFGKMGIGGLDKEF 232
Fly 233 NAIFRRAFASRVFPPELVEQLGIKH------VKGILLYGPPGTGKTLMARQIGTMLNAREP--KI 289
Fly 290 VN-GPQIL-DKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVH 352
Fly 353 DTVV---NQLLAKIDGVEQLNN--ILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQIL 412
Fly 413 NIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEA--- 474
Fly 475 -MEKLRVTRADFL 486 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nsf2 | NP_001287318.1 | CDC48_N | 9..89 | CDD:215012 | |
CDC48_2 | 117..>170 | CDD:215011 | |||
AAA | 259..404 | CDD:214640 | 52/153 (34%) | ||
AAA | 261..402 | CDD:278434 | 49/149 (33%) | ||
AAA | 543..674 | CDD:214640 | |||
P-loop_NTPase | 544..>613 | CDD:304359 | |||
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 51/153 (33%) |
AAA | 135..265 | CDD:278434 | 49/149 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |