DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsf2 and CG14183

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster


Alignment Length:909 Identity:170/909 - (18%)
Similarity:317/909 - (34%) Gaps:272/909 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IEKAHRMRAIKCPTDE--------------LSLTNK--------------AIVNV---------S 30
            |:|.:|::.|:.|.::              :.|.||              |:|.|         .
  Fly    21 IKKQNRLKKIEPPEEKAVSYKIYAELYVLYVELVNKLSFIYHNTFQVQKRALVRVLVENATQQLM 85

  Fly    31 DFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRK--------WAT--------LS 79
            ...||:|.:::|     .||: ::|             :|:.||        |.:        |.
  Fly    86 QLKEELKDLEMS-----EYIY-IDK-------------ALIARKLTPRDLVVWRSPQFLYRRPLD 131

  Fly    80 INQEI-DVRPYRFD------ASADIITLVSFETDFLQKKTTTQE--------PYDSDEMAKEFLM 129
            |...| |.|.|..|      |:.|.:. :|.....:|.....:.        .||.    |:||.
  Fly   132 IQNIIADNRLYMNDEEKEEKAAQDWVP-ISEAVKLIQAHERARRARVYKSNIKYDK----KKFLK 191

  Fly   130 QFAGMPLTVGQTLVFQFKDKKFLGLAVK-TLEAVDPRTVGDS---LPKTRNVRFGRILGNTVVQF 190
            ......:    ...|.||..:.:.:.|| |:.:.|.....:|   |.|..:|      .:|.:..
  Fly   192 VHQRKKI----NYKFTFKPDQAMSIPVKRTIFSADFLKADESCENLIKKDDV------ADTAIDD 246

  Fly   191 EKAENSVLN---------LQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFP 246
            |:|.:::.|         .:|....|||:                         .|:.|...:: 
  Fly   247 EEALSAIQNNAACKIQSCWRGYKTRKIVK-------------------------IRKRFKEELY- 285

  Fly   247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAR-EPKIVN-------------GPQILD 297
                   |:|.::  .|..|..|..::|......||..: :...:|             .|.:::
  Fly   286 -------GMKKIR--KLKRPNQTANSIMEMYKNEMLKKKLDEDFINLINDERTRLLQFRSPWMME 341

  Fly   298 KYVGESEANIRRLFAEAEEEEKRLGP-----NSGLHIIIFDEI-------DAICKARGSVAGNSG 350
                :...:||..|.|..:......|     ..|..:::.||.       :::.|...|.|....
  Fly   342 ----DISDHIRAWFKEFYDATGNFHPYPDPVKQGTVLVVIDETMTPMEFQESLGKKPLSKAELKK 402

  Fly   351 VHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIH 415
            :.|....:...|.:.::||.    :....||..:.:|    |.:::..|::...     .|.||.
  Fly   403 LRDKEKKEKRKKKEKLKQLK----MKEAKRRKKLRDA----GVIDIGYELTASK-----AIENIE 454

  Fly   416 TKRMRDFNKIASDVD----------------------NNEIAAKTKNFSGAELEGLVRAAQSTAM 458
             :.|:.::|...:||                      :.|:......:...|.| |:|.|.:...
  Fly   455 -ETMKKYSKDWRNVDEYLNKNHDPIKEWVTEEQLAKIHQEVRGLVDEYMRVEYE-LLREALAKDN 517

  Fly   459 NRLIKADSKVHVDPEAMEKLRVTRADF-----LHALDNDIKPAFGAAQEMLE----------NLL 508
            :...|| .||....:..||.:....|.     |.:|.|::|.| |..:|:..          |.:
  Fly   518 DEKYKA-LKVKYPKKKKEKRKKKPKDMTGDRTLESLYNELKDA-GIIEEIGHRDFDEFITDFNFV 580

  Fly   509 A------RGIINWGP---PVTELLEDGMLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQL 564
            |      .|:...||   .:..::::.||.:.:....:..   |:|:.|..||||..|...:|..
  Fly   581 ADDTRDEDGLTTLGPAKGDIKMVIQESMLGMGEFDVPKPK---SLLLIGPLNSGKRLLCEIIASE 642

  Fly   565 SDFPFVKVCSPEDMVGFTESAK-CLHIRKIFDDAYRSTLSCIVVDNVERLL------DYGPIGPR 622
            .|..|:.: |||:...:.:..| .||:......|::.|:  :.::...||.      :...|.||
  Fly   643 LDAVFMNL-SPENTYKYAKDLKYFLHVILKVAKAFQPTI--MYIEEAHRLFWKKVPPEAVEINPR 704

  Fly   623 YSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDVLEEMEMLSAFTSVLHVSNLSTPENVLAVLDD 687
            ....:|.:.::    :|.|....::|..:|.........:..||..||.:.......:.|..|:.
  Fly   705 LLGTSLASKIL----KPLKKNDKIVLVGTSNMPWAANGGIKRAFQKVLLIPKCDYGTSFLLWLEL 765

  Fly   688 SDLFSPEELQSIARKMAGKRLCI--------GIKKLLALIDMIRQS----EPHQRVIKFLSKME 739
            ....:|::::..|.....:.|..        .:|:.|.:...:|..    :|::.:..||||.|
  Fly   766 MTENAPDDMKEYAYSALARVLQAYNSGDIDDNVKETLNIDRKMRLKNEALDPNEFLEYFLSKNE 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 24/133 (18%)
CDC48_2 117..>170 CDD:215011 12/53 (23%)
AAA 259..404 CDD:214640 28/170 (16%)
AAA 261..402 CDD:278434 28/166 (17%)
AAA 543..674 CDD:214640 33/137 (24%)
P-loop_NTPase 544..>613 CDD:304359 18/69 (26%)
CG14183NP_649172.3 AAA 622..751 CDD:278434 32/135 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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