DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and FIGNL2

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_016874787.1 Gene:FIGNL2 / 401720 HGNCID:13287 Length:767 Species:Homo sapiens


Alignment Length:226 Identity:64/226 - (28%)
Similarity:102/226 - (45%) Gaps:40/226 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 AFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGES 303
            |:...:.||           :.:||:||.|.||.|:.|.:.|.|.|...:: .|..:......|.
Human   531 AYPGSLRPP-----------RTVLLFGPRGAGKALLGRCLATQLGATLLRL-RGATLAAPGAAEG 583

  Fly   304 EANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKAR--GSVAGNSGVHDTVVNQLLAKIDG- 365
            ...::..||.|     |..|.|   :::..|::|:..||  |:.||.:     :...|||.:|| 
Human   584 ARLLQAAFAAA-----RCRPPS---VLLISELEALLPARDDGAAAGGA-----LQVPLLACLDGG 635

  Fly   366 -VEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDV 429
             ....:.:||:|.|:|...:|||..|  |..::..::||:...|.|||      .|...:....:
Human   636 CGAGADGVLVVGTTSRPAALDEATRR--RFSLRFYVALPDSPARGQIL------QRALAQQGCAL 692

  Fly   430 DNNEIAA---KTKNFSGAELEGLVRAAQSTA 457
            ...|:||   .|:.|||.||..|.:.|.:.|
Human   693 SERELAALVQGTQGFSGGELGQLCQQAAAGA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 45/164 (27%)
CDC48 <225..>611 CDD:273521 64/226 (28%)
FIGNL2XP_016874787.1 RecA-like_fidgetin 507..669 CDD:410931 45/164 (27%)
HflB <643..>720 CDD:440233 27/84 (32%)
Blue background indicates that the domain is not in the aligned region.

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