DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsf2 and si:dkey-195m11.8

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_021332888.1 Gene:si:dkey-195m11.8 / 324372 ZFINID:ZDB-GENE-030131-3092 Length:269 Species:Danio rerio


Alignment Length:96 Identity:23/96 - (23%)
Similarity:36/96 - (37%) Gaps:29/96 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GLHYIFALEKISGPELPLGH-VGFSLVQRKWATL------------------SINQE--IDVRPY 89
            |||....|.  ...|||... :||.  |.|.|.:                  |:|:.  .|::.|
Zfish   170 GLHTPTPLH--GAAELPRNRKIGFD--QSKTARVSPYTIRDKSERQNGDSGGSVNESCGTDIQSY 230

  Fly    90 RFDASADIITLVSFETDFLQKKTTTQEPYDS 120
            |.:.   :.||...|.| .:.|::...|.::
Zfish   231 RPER---LSTLPDLEAD-AEGKSSHLRPLET 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012 15/63 (24%)
CDC48_2 117..>170 CDD:215011 1/4 (25%)
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912
CDC48 <225..>611 CDD:273521
si:dkey-195m11.8XP_021332888.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.