Sequence 1: | NP_001287318.1 | Gene: | Nsf2 / 41694 | FlyBaseID: | FBgn0266464 | Length: | 752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011930.1 | Gene: | Trip13 / 292206 | RGDID: | 1308516 | Length: | 432 | Species: | Rattus norvegicus |
Alignment Length: | 436 | Identity: | 89/436 - (20%) |
---|---|---|---|
Similarity: | 174/436 - (39%) | Gaps: | 90/436 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 106 DFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKT-------LEAVD 163
Fly 164 PRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGL 228
Fly 229 ------DKEFNA-IFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAR- 285
Fly 286 -------EPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARG 343
Fly 344 SVAGNSGVHDT--VVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQ 406
Fly 407 G--------------------RVQILNIHTKRMRDFNKIASDVDNN---------EIAAKTKNFS 442
Fly 443 GAEL-------EGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVT 481 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nsf2 | NP_001287318.1 | CDC48_N | 9..89 | CDD:215012 | |
CDC48_2 | 117..>170 | CDD:215011 | 12/59 (20%) | ||
AAA | 259..404 | CDD:214640 | 36/154 (23%) | ||
AAA | 261..402 | CDD:278434 | 36/150 (24%) | ||
AAA | 543..674 | CDD:214640 | |||
P-loop_NTPase | 544..>613 | CDD:304359 | |||
Trip13 | NP_001011930.1 | RecA-like_Pch2-like | 121..319 | CDD:410916 | 44/207 (21%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |