Sequence 1: | NP_001287318.1 | Gene: | Nsf2 / 41694 | FlyBaseID: | FBgn0266464 | Length: | 752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033529.3 | Gene: | Vcp / 269523 | MGIID: | 99919 | Length: | 806 | Species: | Mus musculus |
Alignment Length: | 616 | Identity: | 176/616 - (28%) |
---|---|---|---|
Similarity: | 278/616 - (45%) | Gaps: | 133/616 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 RNVRFGRIL----GNTVVQFEKAE-----------NSVLNLQGRSKGKIVRQSIINPDWDFGKMG 224
Fly 225 IGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPK- 288
Fly 289 ---IVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSG 350
Fly 351 VHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIH 415
Fly 416 TKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNR---LIKADSKVHVDPEAMEK 477
Fly 478 LRVTRADFLHALDNDIKPA---------------FGAAQEMLENLLARGIINWGPPV---TELLE 524
Fly 525 DGMLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDM-VGFTESAKCL 588
Fly 589 HIRKIFDDAYRSTLSCIV----VDNVER-----LLDYGPIGPRYSNLTLQALLVLLKKQPPKGRK 644
Fly 645 LLILCTSSRRDVLEEMEMLSAFTSVLHVSNLSTPENVLAVLDDSDLFSPEEL-QSIARKMAGKRL 708
Fly 709 CIGIKKLLALIDMIRQSEPHQRV-IKFLSKM 738 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nsf2 | NP_001287318.1 | CDC48_N | 9..89 | CDD:215012 | |
CDC48_2 | 117..>170 | CDD:215011 | |||
AAA | 259..404 | CDD:214640 | 62/148 (42%) | ||
AAA | 261..402 | CDD:278434 | 61/144 (42%) | ||
AAA | 543..674 | CDD:214640 | 32/140 (23%) | ||
P-loop_NTPase | 544..>613 | CDD:304359 | 23/78 (29%) | ||
Vcp | NP_033529.3 | CDC48 | 25..764 | CDD:273521 | 176/616 (29%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 708..727 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 768..806 | ||||
Interaction with UBXN6. /evidence=ECO:0000250 | 797..806 | ||||
PIM motif. /evidence=ECO:0000250|UniProtKB:P55072 | 802..806 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |