DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and Iqca1l

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_808344.3 Gene:Iqca1l / 231045 MGIID:3045319 Length:825 Species:Mus musculus


Alignment Length:721 Identity:135/721 - (18%)
Similarity:250/721 - (34%) Gaps:198/721 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFLGL 154
            :|......|.:......:||:|...|:        :...|:|.||..:..||......::.|||.
Mouse   203 KFSRDQGAIVIQKVWKGYLQRKRIEQD--------RRVEMEFIGMLPSPNQTARLNTLNQAFLGE 259

  Fly   155 AVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRSKGKIVRQSIIN---- 215
            ..:.:..|:           :...|...:|.|.....:.|..  :::.|.|.:| ||..|.    
Mouse   260 ESRRMRQVE-----------KEEEFQEAIGKTYESLTETEGP--DMKERMKDQI-RQWFIECHAL 310

  Fly   216 ----PDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMAR 276
                ||:.....|...|               :|..:..||:.:                .|.|:
Mouse   311 TGRFPDYPDEASGGSYL---------------IFADKTPEQVRL----------------DLEAQ 344

  Fly   277 QIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEK----RLGPNSGLHIIIFDEIDA 337
            ...:....:|.|..|    .:|...:.|...:::..|..::|.    |:.|:..:.:|       
Mouse   345 AQESRKKDQEKKEKN----KEKEKEKKEKKKKKVKEEKVKKEPEVMFRVLPSKSIPVI------- 398

  Fly   338 ICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISL 402
                      |:| |:...:...::.|......|           ...|.|....|.:|:|||  
Mouse   399 ----------NAG-HEEYTSVWKSRYDNKHPSQN-----------FDSETLREEKRKQVEMEI-- 439

  Fly   403 PNEQGRVQILNIHTKRMRDFNKIASDVDNNEI-AAKTKNFSGAELEGLVRAAQSTAMNRLIKADS 466
                 |||:..:..:.:::. ::|  ||..|. ..|:....|.:..|..:..:....:|.:.:..
Mouse   440 -----RVQVDELMRQELKNL-RLA--VDREETRPLKSPKKKGGKKSGKKKKEKDLTPDRSVDSLF 496

  Fly   467 KVHVDPEAMEK-LRVTRADFLH---------ALDNDIKPAFGAAQEMLENLLARGIINWGPPVTE 521
            :..|....::| ..||.:|::.         .|.|  |....:..::.:|:...|::..|.....
Mouse   497 EELVIIGLIKKSALVTLSDYIGDCLYLGSTLTLAN--KMPMPSLFDIRQNMALYGVLRLGSHDIH 559

  Fly   522 LLEDGMLSVQQAKATESSGLV-SVLIEGAPNSGKSAL--------AANLAQLSDFPFVKVCSPED 577
            .:               :.|| |:|:.|....||..|        .|||..|         ||::
Mouse   560 TM---------------APLVRSILLVGPSGMGKKMLVQAVCTETGANLFDL---------SPDN 600

  Fly   578 MVG---FTESAKCL-HIRKIFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQAL---LVLL 635
            ::|   ....|:.| ||  :|..|.....|.|.:.|.|:.. |..:......:..:.:   |:..
Mouse   601 LMGKYPGKNGAQLLVHI--VFKVARLLQPSVIWIGNTEKTF-YKKVPKEERTMDPKRIKKDLMRA 662

  Fly   636 KKQPPKGRKLLILCTSSRRDVLEEMEMLSAFTSVLHVS----------------------NLSTP 678
            .||...|.:::::.|:.|..:.|...:...:..:|.:.                      .|::.
Mouse   663 TKQLSPGDRVMLIGTTERPQLAEMKGLCRFYERILFIPRPDYASRYVLWKRMIESQGRGVQLTSS 727

  Fly   679 ENVLAVLDDSDLFSPEE-LQSIARKMAGKRLCIGIKKLLA---LIDMIRQSEPHQRVIKFLSKME 739
            .:|.|:...||.::|.. ||||...:..:||...|||.|.   .:..:.:.:|..|        |
Mouse   728 LDVSALARVSDGYTPSHILQSIQSVLTERRLLQLIKKPLVASEFVGHLARLDPVYR--------E 784

  Fly   740 EEGGLE 745
            ||..|:
Mouse   785 EEESLK 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011 10/52 (19%)
AAA 259..404 CDD:214640 24/148 (16%)
AAA 261..402 CDD:278434 24/144 (17%)
AAA 543..674 CDD:214640 32/167 (19%)
P-loop_NTPase 544..>613 CDD:304359 22/80 (28%)
Iqca1lNP_808344.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..378 5/37 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..487 5/27 (19%)
SpoVK <566..745 CDD:223540 38/190 (20%)
AAA 568..701 CDD:278434 31/144 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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