Protein Alignment Nsf2 and ZK938.3

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: NP_001364588.1
• Gene: ZK938.3 / 191468
• WormBaseID: WBGene00014160
• Length: 616
• Species: Caenorhabditis elegans
• Alignment Length: 487
• Identity: 96/487 - (19%)
• Similarity: 161/487 - (33%)
• Gaps: 182/487 - (37%)

  Fly   102 SFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRT 166
            :|...||:.:|.....:::.|..:|  .|...:...|   |:.|..::|:        :|:..|.
 Worm   180 AFRESFLKTQTDFDIDFENAEAEQE--TQLLSIEYAV---LIIQKLERKY--------QAISRRN 231

  Fly   167 VGDSLPKTRNVRFGR----ILGNTVVQFEKAENSVLNLQGRSKG----KIVRQ------SIIN-- 215
            .         |||.|    .|....|:.: |..:.:.:|.|::|    |:||:      :|:|
 Worm   232 Y---------VRFVRERAAELHGLKVEID-ATQAAIRIQARTRGYFARKLVREMREKELNILNMT 286

  Fly   216 PDWDFGKM--------------GIGGLD-----KEFN---------------------------- 233
            |:....|.              |:||.:     :|||
 Worm   287 PESYIRKRCAERERKRKEGLAGGVGGGEIIEQIEEFNTDLAEALKLLKTHFFFPTSDLTDIKPSA 351

  Fly   234 ---------AIFRRAFASRVFPP-------ELVEQLGI--------------------------- 255
                     .|||.|....:..|       ||..|..|
 Worm   352 LPIDLNNQETIFRDACFRGIVSPLAQIELSELTSQREICKIENRQFKFDFRSFLVQTVCTPCSLG 416

  Fly   256 ---------KHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLF 311
                     :.::.:||.|.|.:|||..||.|....:      |....|....|...:..|..:.
 Worm   417 TWQKQKSKDQKMQWLLLSGAPDSGKTTWARAISRACH------VTHVHISKNVVNMGKRKIYTVV 475

  Fly   312 AEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNI---L 373
            .:..::||||       ::..|.||.:.|        ...|....::.:...:.:..|:||   :
 Worm   476 KKLAKQEKRL-------LVSIDRIDVMKK--------DPKHKGYTHRQILLRNFLSDLSNIKFVM 525

  Fly   374 VIGMTN-RRDMIDEAL--LRPGRLEVQMEISLPNEQGRVQIL------NIHTKRMRDF-NKIASD 428
            |||||. ..|.:|..:  |.|    :|..:|.|....|..:.      |...:|:..| |:|.
 Worm   526 VIGMTRVPLDDLDSYISDLFP----LQATLSNPTNATRYDLAVDCLSRNWEQERLPKFPNRIF-- 584

  Fly   429 VDNNEIAAKTKNFSGAELEGLVRAAQSTAMNR 460
                :|..:||:.:..:....|....|.|.|:
 Worm   585 ----DIEKQTKDQTRGKAAKFVTNRWSAANNK 612

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012
		CDC48_2	117..>170	CDD:215011	9/52 (17%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	51/266 (19%)
		CDC48	<225..>611	CDD:273521	65/334 (19%)
ZK938.3	NP_001364588.1	IQCD	<253..278	CDD:467745	6/24 (25%)
		AAA	431..545	CDD:459627	33/134 (25%)