DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsf2 and Nsf

DIOPT Version :9

Sequence 1:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_032766.2 Gene:Nsf / 18195 MGIID:104560 Length:744 Species:Mus musculus


Alignment Length:741 Identity:471/741 - (63%)
Similarity:584/741 - (78%) Gaps:6/741 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQR 73
            |:|.:||||||||:|.|:||..|| :..::|.:...|...|||.|.  :.|.:..|.:.|||.||
Mouse     6 MQAARCPTDELSLSNCAVVNEKDF-QSGQHVMVRTSPNHKYIFTLR--THPSVVPGCIAFSLPQR 67

  Fly    74 KWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTV 138
            |||.|||.|:|:|..|.||.:...|..::.|.||||||.....|||:|:||.||:.||.....:|
Mouse    68 KWAGLSIGQDIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSV 132

  Fly   139 GQTLVFQFKDKKFLGLAVKTLEAVDPRTV-GD-SLPKTRNVRFGRILGNTVVQFEKAENSVLNLQ 201
            ||.|||.|.||.| ||.||.:||:||..: |: :..|.:.:..|.::||:.|.|||||||.|||.
Mouse   133 GQQLVFSFNDKLF-GLLVKDIEAMDPSILKGEPASGKRQKIEVGLVVGNSQVAFEKAENSSLNLI 196

  Fly   202 GRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGP 266
            |::|.|..|||||||||:|.|||||||||||:.||||||||||||||:|||:|.|||||||||||
Mouse   197 GKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGP 261

  Fly   267 PGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIII 331
            ||.||||:|||||.||||||||:||||:||:|||||||||||:|||:||||::|||.||||||||
Mouse   262 PGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIII 326

  Fly   332 FDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEV 396
            |||||||||.|||:||::|||||||||||:|||||||||||||||||||.|:|||||||||||||
Mouse   327 FDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEV 391

  Fly   397 QMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRL 461
            :|||.||:|:||:|||:|||.|||....:::|||..|:|.:|||||||||||||||||||||||.
Mouse   392 KMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456

  Fly   462 IKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDG 526
            |||.:||.||.|..|.|:|||.|||.:|:||||||||..||...:.:..|||.||.|||.:|:||
Mouse   457 IKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDG 521

  Fly   527 MLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIR 591
            .|.|||.|.::.:.|||||:||.|:|||:||||.:|:.|:|||:|:|||:.|:||:|:|||..::
Mouse   522 ELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMK 586

  Fly   592 KIFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDV 656
            |||||||:|.|||:|||::||||||.|||||:|||.||||||||||.||:||||||:.|:||:||
Mouse   587 KIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDV 651

  Fly   657 LEEMEMLSAFTSVLHVSNLSTPENVLAVLDDSDLFSPEELQSIARKMAGKRLCIGIKKLLALIDM 721
            |:|||||:||::.:||.|::|.|.:|..|:....|..:|..:||:::.||::.|||||||.||:|
Mouse   652 LQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716

  Fly   722 IRQSEPHQRVIKFLSKMEEEGGLEMD 747
            ..|.:|..||.|||:.|.|||...:|
Mouse   717 SLQMDPEYRVRKFLALMREEGASPLD 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 38/79 (48%)
CDC48_2 117..>170 CDD:215011 29/54 (54%)
AAA 259..404 CDD:214640 124/144 (86%)
AAA 261..402 CDD:278434 121/140 (86%)
AAA 543..674 CDD:214640 90/130 (69%)
P-loop_NTPase 544..>613 CDD:304359 43/68 (63%)
NsfNP_032766.2 CDC48_N 6..83 CDD:215012 38/79 (48%)
CDC48_2 111..183 CDD:215011 33/72 (46%)
AAA 254..399 CDD:214640 124/144 (86%)
AAA 256..397 CDD:278434 121/140 (86%)
AAA 538..670 CDD:214640 90/131 (69%)
AAA 539..668 CDD:278434 88/128 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837855
Domainoid 1 1.000 247 1.000 Domainoid score I2152
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4502
Inparanoid 1 1.050 906 1.000 Inparanoid score I371
Isobase 1 0.950 - 0 Normalized mean entropy S525
OMA 1 1.010 - - QHG52406
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003053
OrthoInspector 1 1.000 - - otm42921
orthoMCL 1 0.900 - - OOG6_101440
Panther 1 1.100 - - LDO PTHR23078
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1308
SonicParanoid 1 1.000 - - X2410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.