DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and Pex1

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_061513544.1 Gene:Pex1 / 1271027 VectorBaseID:AGAMI1_013104 Length:1141 Species:Anopheles gambiae


Alignment Length:260 Identity:88/260 - (33%)
Similarity:139/260 - (53%) Gaps:36/260 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLF 311
            |::.|...:::..||||:||||||||.:..::....|.|... |.||::|.||:|:||.|:|.||
Mosquito   879 PKIFEASPLRNQAGILLFGPPGTGKTYLVSKLAKTWNLRMIS-VKGPELLAKYIGQSEENVRNLF 942

  Fly   312 AEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIG 376
            ..|...:.        .::.|||.|::...||.  .::||.|.||||||.::||||.|..:.|||
Mosquito   943 DRARSAKP--------CVLFFDEFDSLAPRRGH--DSTGVTDRVVNQLLTELDGVEGLQGVTVIG 997

  Fly   377 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNF 441
            .|:|.:::|.||||.||::..:|.:||....|::|.:.|:|.:    .:..|||..|.|.|::.:
Mosquito   998 ATSRPELLDPALLRSGRIDRLVECTLPGVTARLEIFSNHSKSL----TLDKDVDLREFAVKSEYY 1058

  Fly   442 SGAELEGLVRAAQSTAMNRLIKAD----------SKVH-----------VDPEAMEKLRVTRADF 485
            :||::..::..|...|:...:..|          |:.|           :.|..:.|.|.|.|.|
Mosquito  1059 TGADIRSILTTANMLAVQECLSNDPEKVPEQITVSQRHLAEAFSSTRPSLSPRDIAKYRETYARF 1123

  Fly   486  485
            Mosquito  1124  1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 62/152 (41%)
CDC48 <225..>611 CDD:273521 88/260 (34%)
Pex1XP_061513544.1 None
Blue background indicates that the domain is not in the aligned region.

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