DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsf2 and LOC1268587

DIOPT Version :10

Sequence 1:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster
Sequence 2:XP_061506887.1 Gene:LOC1268587 / 1268587 VectorBaseID:AGAMI1_010206 Length:759 Species:Anopheles gambiae


Alignment Length:756 Identity:557/756 - (73%)
Similarity:642/756 - (84%) Gaps:13/756 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQR 73
            |:|.|||||||||.|:||||..||..:|||:|:|..||.|:||.:|:....|:..|.:||||:||
Mosquito     5 MKAAKCPTDELSLKNRAIVNAGDFPADVKYIDLSTAPGQHFIFYIERTVSGEINPGTIGFSLLQR 69

  Fly    74 KWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTV 138
            |||||||||:|.|:||.|:.|::::..::.|.|||||||.|.||||||:||::||:||||:.:||
Mosquito    70 KWATLSINQDISVKPYHFERSSEVLCSIALEVDFLQKKTVTHEPYDSDQMARDFLLQFAGLAVTV 134

  Fly   139 GQTLVFQFKDKKFLGLAVKTLEAVDPRTV---------GDSLPKTRNVRFGRILGNTVVQFEKAE 194
            ||.|||.|:|||.|.|||||||.:|...:         |:...:.:.|.|||:|.||||.|||||
Mosquito   135 GQPLVFSFQDKKLLCLAVKTLEVIDAAAMAGGASSSGSGNGPVEPKRVNFGRLLANTVVTFEKAE 199

  Fly   195 NSVLNLQGRSKGKI--VRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKH 257
            :|.|||.|||||::  |||||||||||||:|||||||:||||||||||||||||||:|||||.||
Mosquito   200 SSGLNLVGRSKGRVTAVRQSIINPDWDFGRMGIGGLDREFNAIFRRAFASRVFPPEVVEQLGCKH 264

  Fly   258 VKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLG 322
            |||||||||||||||||||||||||||||||||||||||||||||||||:|||||:|||||||||
Mosquito   265 VKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFADAEEEEKRLG 329

  Fly   323 PNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEA 387
            |.|||||||||||||||||||:|.|||||||||||||||||||||||||||||||||||||||||
Mosquito   330 PASGLHIIIFDEIDAICKARGTVGGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEA 394

  Fly   388 LLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRA 452
            ||||||||||||||||||:||||||||||:||::|.|:|.|||..|:..||||||||||||||||
Mosquito   395 LLRPGRLEVQMEISLPNEEGRVQILNIHTRRMKEFKKLAPDVDLRELGQKTKNFSGAELEGLVRA 459

  Fly   453 AQSTAMNRLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGP 517
            ||||||||||||.|||.|||.|||||.|||.|||||.:||||||||.|.|.|||.|.|||||||.
Mosquito   460 AQSTAMNRLIKAASKVEVDPAAMEKLMVTREDFLHAFENDIKPAFGTAAEALENYLTRGIINWGL 524

  Fly   518 PVTELLEDGMLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFT 582
            ||..:||||.|..:||:.||.|||||||:||.||:||:||||.||:||||||||||||::||||:
Mosquito   525 PVAHILEDGALYTEQARGTEGSGLVSVLLEGPPNAGKTALAAKLAKLSDFPFVKVCSPDEMVGFS 589

  Fly   583 ESAKCLHIRKIFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLI 647
            |.||||.|||.||||||||.|||:|||:|||||||||||||||||||||||||||.||||:||||
Mosquito   590 EGAKCLQIRKYFDDAYRSTFSCILVDNIERLLDYGPIGPRYSNLTLQALLVLLKKSPPKGKKLLI 654

  Fly   648 LCTSSRRDVLEEMEMLSAFTSVLHVSNLSTPENVLAVLD-DSDLFSPEELQSIARKMAGKRLCIG 711
            |||:|||.|||:||||||||:||||.||||.::::|||: :.|:|...||.:|.:::.|:|:.:|
Mosquito   655 LCTTSRRQVLEDMEMLSAFTAVLHVPNLSTADHLIAVLEQEPDVFGRNELAAIYKRLKGRRIFVG 719

  Fly   712 IKKLLALIDMIRQSEPHQRVIKFLSKMEEEGGLEMDRVQGH 752
            |||||.|||:.||.:|..|::|||||:||||.:| |....|
Mosquito   720 IKKLLDLIDLARQMDPQTRMMKFLSKLEEEGAIE-DATVAH 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012 48/79 (61%)
CDC48_2 117..>170 CDD:215011 34/61 (56%)
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 167/175 (95%)
CDC48 <225..>611 CDD:273521 328/385 (85%)
LOC1268587XP_061506887.1 None

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