Protein Alignment Nsf2 and Pex6

DIOPT Version :10

• Sequence 1: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Sequence 2: XP_063122650.1
• Gene: Pex6 / 117265
• RGDID: 621637
• Length: 1034
• Species: Rattus norvegicus
• Alignment Length: 485
• Identity: 129/485 - (26%)
• Similarity: 208/485 - (42%)
• Gaps: 111/485 - (22%)

  Fly    13 KCPTDELSLTNKAIVNV-----SDFTEEVKYVDISPGPGLHYIFALEKISGPELPLG-HVGFSLV 71
            :||...:..|...:.::     :.|..|::...:|....|..:.||.    ..|||| .|..|.:
  Rat   563 RCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQALT----AHLPLGQEVNLSQL 623

  Fly    72 QRKWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPL 136
            .|:.|...:.   |:......||....|.:       :.........|..|:..      ||.||
  Rat   624 ARRCAGFVVG---DLYALLTHASRAACTRI-------KAAGLAMSEEDEGELCA------AGFPL 672

  Fly   137 TVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQ 201
                 |...|      |.|:..|:....:.||  .||..:|.:..:.|...|:.|..|...|.|:
  Rat   673 -----LAEDF------GQALDQLQTAHSQAVG--APKIPSVSWHDVGGLQDVKKEILETIQLPLE 724

  Fly   202 GRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGP 266
                                                        .|||: .||::. .|:||:||
  Rat   725 --------------------------------------------HPELL-SLGLRR-SGLLLHGP 743

  Fly   267 PGTGKTLMARQIG-----TMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSG 326
            |||||||:|:.:.     |.|:      |.||::::.|||:||.|:|.:||.|    :...|
  Rat   744 PGTGKTLLAKAVATECSLTFLS------VKGPELINMYVGQSEENVREVFARA----RAAAP--- 795

  Fly   327 LHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRP 391
             .||.|||:|::..:||....:.||.|.||:||||::||:....::.|||.|||.|::|.|||||
  Rat   796 -CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRP 859

  Fly   392 GRLEVQMEISLPNEQ-GRVQILNIHTKRMRDFNKIASDVD-NNEIAAKTKNFSGAELEGLVRAAQ 454
            ||.:..:.:....:: .::::|:..|::.    |:.:.|. .|.:.......:||:|..|...|.
  Rat   860 GRFDKLVFVGASEDRASQLRVLSAITRKF----KLEASVSLMNVLDCCPPQLTGADLYSLCSDAM 920

  Fly   455 STAMNRLIKADSKVHVDPEAMEKLRVTRAD 484
            .||:.|.:: |.:......|::..:.||.|
  Rat   921 MTALKRRVR-DLEEGEPLPALDGNQETRGD 949

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012	18/81 (22%)
		CDC48_2	117..>170	CDD:215011	13/52 (25%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	68/180 (38%)
		CDC48	<225..>611	CDD:273521	86/267 (32%)
Pex6	XP_063122650.1	None