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Protein Alignment CG9297 and Ehd4

DIOPT Version :10

Sequence 1:	NP_788674.1	Gene:	CG9297 / 41688	FlyBaseID:	FBgn0038181	Length:	952	Species:	Drosophila melanogaster
Sequence 2:	NP_598599.2	Gene:	Ehd4 / 98878	MGIID:	1919619	Length:	541	Species:	Mus musculus

Alignment Length:	382	Identity:	107/382 - (28%)
Similarity:	192/382 - (50%)	Gaps:	19/382 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   517 LDEEFNAREKATD-NVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGP 580
            :..:...||::.. :..:.:...::.:|:..|.|||..|::.:..:....|.:..:||:||.:|.
Mouse     5 MGRQAGGRERSGGMDAVQTVTGGLRSLYQRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQ 69

  Fly   581 WSGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFG 643
            :|.||::.:.||.:.::.  .:|.|.||:...|..:|:|.......|..|..|  ..|..|.:||
Mouse    70 YSTGKTTFIRYLLEQDFP--GMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFG 132

  Fly   644 QGLEERLRGLKMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKL 707
            .....|....::.:::|:.::|::.||||...|| :||.:.|....|||.:|.|.|.|::|..||
Mouse   133 NAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKL 197

  Fly   708 DVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWT 772
            |:..|....:...:|::.:.|::|||||.|..::|:||.|||:|::..::::.:...:|..|.|.
Mouse   198 DISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWA 262

  Fly   773 HPYQDGAPARLLLAQERAFLRDLRTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTL 837
            .|.|:....||..|:.:...||:::...|....|:....:.|...:.||.::. ||.  .....:
Mouse   263 QPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIIS-YLK--KEMPNM 324

  Fly   838 FG--NKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKK 892
            ||  ||||  :.|...|:   ||..|.....||..|.|:.:..::...   .|:|.|
Mouse   325 FGKENKKR--ELIYRLPE---IYVQLQREYQISAGDFPEVKAMQEQLE---NYDFTK 373

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.