DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9297 and EHD2

DIOPT Version :9

Sequence 1:NP_001262553.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_567299.2 Gene:EHD2 / 825902 AraportID:AT4G05520 Length:546 Species:Arabidopsis thaliana


Alignment Length:493 Identity:125/493 - (25%)
Similarity:227/493 - (46%) Gaps:72/493 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 AQEDEPQTDGAQDAADDDDDTKPEDELLWEGHIPENRRSRQHITELLQLDEE------------- 520
            |||....|   .|......|.|..:..:.||  .||..|:|.::: ..:|.|             
plant    84 AQEGHEIT---SDLLKGSIDMKSVELPVLEG--LENVVSKQKVSK-TNVDVEDNVVTKPQVTAKT 142

  Fly   521 --FNARE--KATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPW 581
              |.::.  |...||..|: ..:||:|...:||||..|::.|.::...:..:..:||:::.:|.:
plant   143 PWFKSKSIIKPQVNVVTIV-DGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQY 206

  Fly   582 SGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLA--ADYTFAGLQKFGQ 644
            |.||::.:.:|...:| |.: ..|.||:...|.:.|.|.:...:.|..:|  ||..|.||..||.
plant   207 STGKTTFIKHLLGCDY-PGA-HIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGG 269

  Fly   645 GLEERLRGLKMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKLD 708
            ....:....:|...:|:::.:|:.||:|...|| :.|.:.|.....||..:.|:|.|::||.|||
plant   270 AFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTGVISWFASKCDMILLLFDPHKLD 334

  Fly   709 VGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWTH 773
            :..|.:.::..|:|.|.:.|::|||||.|..::|:||.|||:|::..::::.:...:|..|....
plant   335 ISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDK 399

  Fly   774 PYQDGAPA----RLLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVR--VRNHAKMVDCYL 828
            |..:.|..    .|...::...|.||    :.|.|::|...:..||...:.  :.:|.|      
plant   400 PINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIMSHLK------ 458

  Fly   829 NTFNNHKTLFGNKK---RIADDIIDH----PQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNP 886
               .....:.|..|   |:.|::.:.    .:.:|:..|          |.|..|.:|:......
plant   459 ---KEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAG----------DFPSVEHFREVLGGYN 510

  Fly   887 LYEFKKLRDTCTYFRGCPITKLDLAIAYELPELAGKYK 924
            :.:|:||:...       |..:|..:.|::|:|..|::
plant   511 IDKFEKLKPKM-------IQAVDDMLGYDIPDLLKKFR 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_001262553.1 TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..569 CDD:293485 9/29 (31%)
EHD 574..813 CDD:206740 73/249 (29%)
EHD2NP_567299.2 EH 20..86 CDD:238009 1/1 (100%)
EF-hand_7 24..78 CDD:290234
EHD_N 163..195 CDD:293485 9/31 (29%)
EHD 199..443 CDD:206740 71/245 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1954
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D377342at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11216
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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