DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and HMGN5

DIOPT Version :9

Sequence 1:NP_001262553.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_110390.1 Gene:HMGN5 / 79366 HGNCID:8013 Length:282 Species:Homo sapiens


Alignment Length:364 Identity:84/364 - (23%)
Similarity:143/364 - (39%) Gaps:95/364 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GSGELQSDQPRGDDDDDDDDGGHSAVDEKDTIEIETVELDSTEDAKSANDLDGDGIPDDEDDDID 118
            |.|:::.:..|       .....||:....|.|::.....|:...|:.:|:      .:|:.|..
Human     8 GQGDMRQEPKR-------RSARLSAMLVPVTPEVKPKRTSSSRKMKTKSDM------MEENIDTS 59

  Fly   119 GDGIPNEKDDDIDGDGIPNDEDDDIDGDGIPNEDDDDIDGDGVPNSKDEDIDGDGVPNSKDEDID 183
            ...:...|.:.:                         ::.|...|:|:.:......|.|:.|.: 
Human    60 AQAVAETKQEAV-------------------------VEEDYNENAKNGEAKITEAPASEKEIV- 98

  Fly   184 GDGKANHEDDDLDGDGTPNHEDEDLDGDGVPNEEDDDLDGDGKINHEDEDLD-GDGVKNDEDEDL 247
             :.|..:.:|..:..|    |.::.....|.|||:|.     |.:.||::.: |:..|.|:||..
Human    99 -EVKEENIEDATEKGG----EKKEAVAAEVKNEEEDQ-----KEDEEDQNEEKGEAGKEDKDEKG 153

  Fly   248 DGDGKVNHEDEDLDGDGVKNEKDDDLDGDGTNNSQDEDLDGDGVPNEKDDDLDG-DGILNEHDGD 311
            :.|||     ||.:|    |||.:|                   ..||:|...| ||..|..||.
Human   154 EEDGK-----EDKNG----NEKGED-------------------AKEKEDGKKGEDGKGNGEDGK 190

  Fly   312 VDGDGVPNEHDHKDSGENADDDDDDDDEDDKEA----VKKRSKREVDAAPVLDIEAPPSPAEEFP 372
            ..|:....|.|.|::|:..:::|..:..|.||.    ||:..|...|..     |......||..
Human   191 EKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGK-----EDEGGNEEEAG 250

  Fly   373 VEEEIVKEASAEEEAEVEAVKEEEPEQEAVQEPEPEPVV 411
            .|:|.:||  .||..|.:.:||::.::|     ||:.:|
Human   251 KEKEDLKE--EEEGKEEDEIKEDDGKKE-----EPQSIV 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_001262553.1 TSP3 repeat_long 167..205 CDD:275366 6/37 (16%)
EHD_N 539..569 CDD:293485
EHD 574..813 CDD:206740
HMGN5NP_110390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..282 83/362 (23%)
HMG14_17 1..93 CDD:307310 17/122 (14%)
Na_Ca_ex <61..281 CDD:332332 71/295 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S11722
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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