DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and ehd3

DIOPT Version :9

Sequence 1:NP_001262553.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_031757636.1 Gene:ehd3 / 779678 XenbaseID:XB-GENE-961795 Length:551 Species:Xenopus tropicalis


Alignment Length:422 Identity:108/422 - (25%)
Similarity:199/422 - (47%) Gaps:48/422 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 REKATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSI 588
            |.|....|.:.:...::::|:..:.|||..||:.:..:....|.:..:||::|.:|.:|.||::.
 Frog    10 RRKKDPEVFQTVSDGLRKLYKTKLLPLEEYYKFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTF 74

  Fly   589 LNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLR 651
            :.||.:.::.  .:|.|.||:...|..:|.|:...|:.|..|..|  ..|..|..||.....|..
 Frog    75 IRYLLEQDFP--GMRIGPEPTTDSFIAVMHGDVEGVIPGNALVVDPKKPFRKLNAFGNAFLNRFV 137

  Fly   652 GLKMKSKILEKVNIVEIPGILEVRKQ-VSRV----------------FPFNDACQWFIDRADIIF 699
            ..::.|.:||.:::::.||||...|| :||.                :.|....:||.:|.|.|.
 Frog   138 CAQLPSPVLESISVIDTPGILSGEKQRISREREESGYSGLRRCTYGGYDFAAVLEWFAERVDRII 202

  Fly   700 LVYDPAKLDVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPL 764
            |::|..|||:..|...::..||..|.:.|::|||||.::.::|:||.|||:|::..::::.:...
 Frog   203 LLFDAHKLDISDEFSEVIKALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIR 267

  Fly   765 MYTTSLWTHPYQDGAPARLLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVRVRNHAKMVD 825
            :|..|.|:||.......:|..|:|:...||:    |.|..:::...|..||...|    ||.::.
 Frog   268 VYIGSFWSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKV----HAYIIS 328

  Fly   826 CYLNTFNNHKTLFG---NKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPL 887
               :.......:||   .||.:...:.:      ||..:.....||..|.|:.:..:|.......
 Frog   329 ---SLKKEMPAVFGKDNKKKELVAGLGE------IYARIEREHQISPGDFPNLKKMQDLLLAQDF 384

  Fly   888 YEFKKLRDTCTYFRGCPITKLDLAIAYELPEL 919
            .:|:.|::..       :..:|..:|:::..|
 Frog   385 NKFQPLKNKL-------LETVDEMLAHDIAHL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_001262553.1 TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..569 CDD:293485 7/29 (24%)
EHD 574..813 CDD:206740 77/261 (30%)
ehd3XP_031757636.1 EHD_N 24..56 CDD:407121 7/31 (23%)
EHD 60..316 CDD:206740 75/257 (29%)
DUF5600 304..410 CDD:407981 23/126 (18%)
EH 454..547 CDD:197477
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D377342at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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